Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00286 ATGGATCGGAGGAGAAACGCGAGTCCTGTCTACGCGCGCCAGTGGAGCGGCGGTTCCAGCAGCACCGGCTCCTCCTCTCCGGCCATGTCGCCGGCTCATCCTCAGTCGCGCCTCGGTTCCACCGGTCTCTCCACCGTCAAGCGCACGCAAAACGTCGCCGCTAAAGCCGCCGCGCAGCGCCTCGCTCGCGTCATGGCGTCTCAGAACGCCGTCGCCGATGACGGCGAGGATGACGACGATCTCGATTTCCGCTTCAGCGCTCCGCCTCCTGCCGCTCTCTCTTCTTTCTCCGGCAGCAGTAACAGGAGCACCAGCGCTAATGCTGCCGCCATTCCTCCGATTTCGGTCGCCCGGCCTAACAGATCTCCTTCTCCTGCGTTAGGTCGGAACTTTGTAGAGCATACTCATTCGGTTCGTTCAACATCAGCTGGAAGGCCGGCTGTTTCGGTTCGCTCAGCGGCAGTGGTGCCACCGAACAAATCCACAATCCGAACGCCTATGGCTATACCGCCTATTGATCCTCCTACCAATCGGAATAGAGACAAAAGGTTTCAATCAGATATATCTATCAGACCACTTAACTCAAAAGACACAGGAGATCAGCGTGAAGCTTCTGCACTCCGTGATGAACTTGATATGCTACAAGAAGAGAATGAGAATATATTAGAAAAGCTAAGACAAGCAGAGGAAAAACGCCAAGAAGTTGAGGCCAGAGCTAGGGAACTTGAGAAACAGGTTGCTTCTCTTGGAGAAGGTGTATCCCTGGAAGCTAAACTGCTGAGCAGGAAAGAAGCTGCTTTGCGTCAAAGAGAGGCTGCTCTCAAGGCTGCTCAACAAACACAGAGTGGGAGAGATGAGGATATTGCAGCCCTTCGTGTGGAAATTCAGAACCTAAAAGATGATGCTGCAGCAGCTTTGGAACAACAGCAAGAAGCTGAAGCTGAAGCAAAGGCACTTCGCACAATGACACAGAGAATGATTTTGACCCAGGAAGAAATGGAGGAAGTTGTTCTGAAGAGGTGTTGGCTAGCCCGCTACTGGGGTCTTGCTGTAAAAAATGGCATATGTGCAGATATAGCGCAATCCAAGCATGAATATTGGTCTTCTCTAGCTCCCCTTCCTTTTGAACTTGTCATCTCTGCTGGACAGAAGGCCAAGGAGGAATCTTGGAACAAAAGTGCTGATGGTTCAGATAGAAGCAGAGCTGTTCGTGATTTGAATGATCTTGCTGGGGAAGGAAATATTGAGAGTATGCTTTCAGTTGAGATGGGTTTGAGGGAACTTGCTTCCTTAAAGGTTGAGGATGCTGTTGTGCTCGCATTAGCCCGACACAGAAGACCAAATTCTGTTCGGCAGTCCGTTTTAGATTCCAAATCACATGGTGATGTCAAATATTCGGAAGCATTTGAATTAAGTGAAGAGGAAGCAGAAGACGTACTTTTCAAAGAGGCATGGTTAACTTATTACTGGAGAAGAGCTTTATTTCATGGTGTGGAAGAAGATATTGCAGAAGAGCGGCTTCAGTTTTGGATTGCCCGCAGTGGGCAGTCACCAACTTCACATGATGCTGTTGATGTTGAGCGAGGTTTGTTGGAGTTGAGGAAGCTGAGTATAGAACAGCAACTTTGGGAAGCATCTCGGAAGGGAATTGATCAGCCTCAGGAGTCAGCGGATGTTAATCATAAGCCTGCCACTGACTCTGATGATGCCTCATCCTGA 1719 0.498 MDRRRNASPVYARQWSGGSSSTGSSSPAMSPAHPQSRLGSTGLSTVKRTQNVAAKAAAQRLARVMASQNAVADDGEDDDDLDFRFSAPPPAALSSFSGSSNRSTSANAAAIPPISVARPNRSPSPALGRNFVEHTHSVRSTSAGRPAVSVRSAAVVPPNKSTIRTPMAIPPIDPPTNRNRDKRFQSDISIRPLNSKDTGDQREASALRDELDMLQEENENILEKLRQAEEKRQEVEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAQQTQSGRDEDIAALRVEIQNLKDDAAAALEQQQEAEAEAKALRTMTQRMILTQEEMEEVVLKRCWLARYWGLAVKNGICADIAQSKHEYWSSLAPLPFELVISAGQKAKEESWNKSADGSDRSRAVRDLNDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALARHRRPNSVRQSVLDSKSHGDVKYSEAFELSEEEAEDVLFKEAWLTYYWRRALFHGVEEDIAEERLQFWIARSGQSPTSHDAVDVERGLLELRKLSIEQQLWEASRKGIDQPQESADVNHKPATDSDDASS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00286 572 Coils Coil 260 280 - -
Cca03g00286 572 MobiDBLite consensus disorder prediction 547 572 - -
Cca03g00286 572 PANTHER MYOSIN 1 552 - -
Cca03g00286 572 Coils Coil 288 322 - -
Cca03g00286 572 MobiDBLite consensus disorder prediction 1 54 - -
Cca03g00286 572 MobiDBLite consensus disorder prediction 12 52 - -
Cca03g00286 572 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 552 IPR040321 GO:0000911
Cca03g00286 572 Coils Coil 204 252 - -
Cca03g00286 572 MobiDBLite consensus disorder prediction 136 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00286 Cca-Chr3 4252524 4268256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00286 1 547 EF-hand Containing Proteins AT5G13260 57.348 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00286 - - gmx:100795139 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00286 03 4252524 4268256 Cca03g00286 03 4252524 4268256 ECH