Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00277 ATGGAAAACGCCGACGGGAGCAGCGAAGTGGAAAACGACGCCGAAATGAAGCTCTTGAGAGACAAATTCAGACTCTCCGCAATCTCCATCACCGAATCCCAAGCAAAACGAAGCGGCAAGGAAGCGTCAAAAGTCGTAGTCACTTGCGTCGCGGATTTGGCCTTCAAATATACAGAGCGAGTGGCTAGGGATCTTCATCTATTTGCGCAGCATGCGAATCGTAAATCTGTAAACATGGAAGATGTGATACTCTGCGCGCATAGGAATGGACATTTATCTGGCTTGTTGAGGACTTTCTCCAATGATTTGAAAGCCAAAGATCCTCAATCTGAGAGGAAGCgaaagaaagaaaccaaaaagaacgacaaaggaaaCACTACTATCTTGGTATGA 393 0.4275 MENADGSSEVENDAEMKLLRDKFRLSAISITESQAKRSGKEASKVVVTCVADLAFKYTERVARDLHLFAQHANRKSVNMEDVILCAHRNGHLSGLLRTFSNDLKAKDPQSERKRKKETKKNDKGNTTILV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00277 130 Gene3D Histone, subunit A 4 109 IPR009072 GO:0046982
Cca03g00277 130 PANTHER CENTROMERE PROTEIN S 4 126 - -
Cca03g00277 130 MobiDBLite consensus disorder prediction 104 123 - -
Cca03g00277 130 MobiDBLite consensus disorder prediction 103 130 - -
Cca03g00277 130 PANTHER CORTISTATIN 4 126 - -
Cca03g00277 130 Pfam CENP-S protein 19 92 IPR029003 GO:0071821
Cca03g00277 130 SUPERFAMILY Histone-fold 40 91 IPR009072 GO:0046982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00277 K11511 - gmx:100798682 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00277 03 4121891 4122826 Cca03g00277 03 4121891 4122826 ECH