Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00247 AtgttgttgttgttgttgttgttgttTCTCTTTTGGCTGCATTGTCATTGCCTGTCACCCTCCTCAGCCATTGCCTCTCCTCGGTTGAGCAATGTGGGCTTCGAGCTCTCGGGGGATATTGGAGTATTGTCCGTGAAAGTTTTCAGCTTTTGGGTCGCGATGCAATTAGGTTTTCTACAAAATGGATCGGATTTATCTCCAGGAAAAAGTCTGGATGGAAGTTTCAGGAAATCTAACTCTGTAATTTCTGCTAGTACTGTCTCTGGGACCTCAGGATTGAGCAAGTTTCTTCCTATTTCCAGAAGAGTCTTAAAGGGGCTCAAGGAATATGGAAGGAAACTGGTTGACTTGGAGTTATTCACTCAATATCTTGAGGAGTGGGTGCTGGAGAATCTAAATGGTGATTCAACAGATGGAATGCAAAGTTTTCGTTCTCCCTTCACAACTGATGAATTGTGTAAACTTGATTTGGCATTAGAGGGGGTTCCATTTCAGCAACTAGTTCGTATGCCAATCTTCTCTGATGTTTCTGATGAGCTTATAGAAGACCAATATTTGGCTGCAGAAGATTACCTTCATGCCATTATCATTGGACTCTGGCGTACATTTTGGCATAAAAGTGGACCACTGCCATTATGTGTCTCTTGCCCCCCTCATATTGGTTCAAAGTTCATTAGTGTTGAAAAGGCTATATCAAGGGGCAGGCTGAGGGAAATGCGTGGTTTAGCTTTATTATCAAAAACTGCCACTGATTCAAAATTTAGATGGGATCATATGGTAGAGTTTGCCTTATTCAAGCCAGAAGTATTCTTGGACAAGGATTTAGGAATATCTGCCAGCACTATTTGTGAAGCTCTCTTTTATGGTTTCCATGTTCTTGTTTCACGGAGTTTGAGCAAGATTAGTTCTGTCAACAGTGACTCAGTTTTCCTTCTAGTTCTAGATTCTAAATGTGGAGCAGTGATGAAGTTCAGCGGTGACCTTGGCAAACTTGATTTATTGAATTCAAGCGATCCATATCTATCAGTGGCTGAATGGATCAAAACTTACACTGAAATTTGTGTTACCCCAGTGGAACCAATATGGAACCGATTAGGAAATCCTAACTGGGGGGACATAGGAACTCTACAAATACTATTGGCAACTTTCTACTCCATTGCACAATGGAATGGACCTCCGCGAAAATCAGTAGCCTCATTGATTTCAGATCATAGCCTTCGCCTTCAGAAGCGCAGAACAGAATGCTGCATCATTGAGACTGAAAATGCACTGGTTCCTTATTATGGGACAACTGAACATCAAGCAGGGGAGATTGTTGAGCTTGATCAAAATGAATTATTTTCAAATAACCGAGCATCACGGCTGAAGCTCAAGTGTGGTGACATATTGGTCTTGGATGATCCACAGCAAGGACAGAAGAGTTTCCAAATTCATGATTCTCTAGTAGGAGGGTACTATTATCTCTACAGTGCAGTTTCTCCTGATCATCCCTCAGAGTTATTGACTTTATATGTAGGTGCTCATCCATCTAGACTTGAGCCTTCCTTGGAGGATATGAGCCTCTGGTACCAGGTGCAACGCCAAACAAAAGTTCTAAACATTTTGAGGAACCAGGGAATCTTAAGCAAATACTTACCTGAAATTGTTGCCTCTGGTAGGATTTTACATTCTGGACCCTGCAAGAAAGAGAGCCCTGGGGGAAGGTGTGATCACCCTTGGTGTGGAACTCCAATACTGGTGACATCTCCTATAGGGGAGCCACTATCATCTGTAATTGCCAATGAAGGGTCATTTTCTGCTGACGAAGCAACGCGCTTGTGCCGAGACTGTCTAGCTGCTCTAAGAAGTGCAGCCATGGCTAATGTTCAGCATGGTGATATTTGTCCAGAGAACATAATACGTGTAGTTGGAAAACAAGGTCTTAGAAACCAAGCTAATATGTATGTCCCCATATCTTGGGGGCGTGCCGTGTTGGAAGATAGAGACAGCCCTGCTATAAACTTGCAGTTCTCATCATCTCATGCACTTCAGCATGGGAAGCTGTGTCCCTCTTCTGATGCTGAAAACGTTGTCTATATCCTCTATTTCATTTGTGGAGGAACCATGTCTCTACAAGATTCTATTGAGTCTGCATTACAATGGCGAGAGAGAAGCTGGGCAAAGCGTTTGATCCAGCAACGTATTGGTCAGGTTTCTGCTCTATTGAAAGCATTTGCTGATTATGTGGATAGCCTTTGTGGAACTCCATACCCTGTTGACTATGATATATGGTTGAAAAGGTTGAACAAGGCTGTGGAAGGCTCAGCAGATAAAGGTAAAATGATTGAAGAAGTTCCCATAACATTAAGATTAGAGGATGCTGCTGAGTCTTCAAGAGCTTCTGTCCCTTAA 2391 0.4224 MLLLLLLLFLFWLHCHCLSPSSAIASPRLSNVGFELSGDIGVLSVKVFSFWVAMQLGFLQNGSDLSPGKSLDGSFRKSNSVISASTVSGTSGLSKFLPISRRVLKGLKEYGRKLVDLELFTQYLEEWVLENLNGDSTDGMQSFRSPFTTDELCKLDLALEGVPFQQLVRMPIFSDVSDELIEDQYLAAEDYLHAIIIGLWRTFWHKSGPLPLCVSCPPHIGSKFISVEKAISRGRLREMRGLALLSKTATDSKFRWDHMVEFALFKPEVFLDKDLGISASTICEALFYGFHVLVSRSLSKISSVNSDSVFLLVLDSKCGAVMKFSGDLGKLDLLNSSDPYLSVAEWIKTYTEICVTPVEPIWNRLGNPNWGDIGTLQILLATFYSIAQWNGPPRKSVASLISDHSLRLQKRRTECCIIETENALVPYYGTTEHQAGEIVELDQNELFSNNRASRLKLKCGDILVLDDPQQGQKSFQIHDSLVGGYYYLYSAVSPDHPSELLTLYVGAHPSRLEPSLEDMSLWYQVQRQTKVLNILRNQGILSKYLPEIVASGRILHSGPCKKESPGGRCDHPWCGTPILVTSPIGEPLSSVIANEGSFSADEATRLCRDCLAALRSAAMANVQHGDICPENIIRVVGKQGLRNQANMYVPISWGRAVLEDRDSPAINLQFSSSHALQHGKLCPSSDAENVVYILYFICGGTMSLQDSIESALQWRERSWAKRLIQQRIGQVSALLKAFADYVDSLCGTPYPVDYDIWLKRLNKAVEGSADKGKMIEEVPITLRLEDAAESSRASVP 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00247 796 Gene3D Transferase(Phosphotransferase) domain 1 585 763 - -
Cca03g00247 796 PANTHER KINASE FAMILY PROTEIN 58 794 - -
Cca03g00247 796 PANTHER KINASE FAMILY PROTEIN 58 794 - -
Cca03g00247 796 SUPERFAMILY Protein kinase-like (PK-like) 570 763 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00247 Cca-Chr3 3623101 3628772 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00247 - - gmx:100805045 1402.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00247 03 3623101 3628772 Cca03g00247 03 3623101 3628772 ECH