Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00240 ATGAACTCTCCAATTCACACCCCTTCATCAGCGtcttcttcttcctcctcctcctatatgcttcgtcctcctccatgcctcactcatgcttctAGCAACCTCAAGTGTCCTCTGTTGTTGCCACAGACAACCTCTACCTTGCAAAAGAAGTACAGCTGCTTTGGAGCTCATGTGGAGGCATCTTTTAACACTAATCCCTTGAAAAGTTACACATCAATCAGATGTTCTCCAAACCAATCACTCAAGAAACAGTTGTTCTCAGTAGGATCTTTAGCAACTCCAACAGCTCAAGATGTTTCTGATACCACTCTTATTGGTGATGATAAGATTGCAGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCGGATATAATACGGTTGCCAAGGATATTTAGTTTTCTTCAAAAACCATTAGCCCAATTTGTATCTGTTGCAAGGGCGCCAAAGAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGCTCTCCTCTCAGACGGATGACTGATGCACAGGCTGAAGAATTGAAGAAATCTCTTTGGGCAAAGAATGTCCCAGCTAAAGTATATGTGGGCATGCGTTACTGGCATCCATTCACTGAAGAAGCTATTGAACAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTTCTTCCTCTTTATCCACAATTTTCAATATCAACCAGTGGCTCTAGCCTACGTCTACTGGAGAGTATATTCCGTGAGGATGAGTATTTAGTCAACATGCAACATACGGTAATACCTTCATGGTATCAACGTGAAGGATACATAAAGGCCATGGCAAATTTAATTGAAAAAGAGCTGAAGAGTTTTGACTGTCCTGAGGAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTGGAAGAGGCTGGTGATCCATACAAGGCTGAGATGGAGGAATGTGTGGATTTGATCATGGAAGAACTTGAGACAAGAAAGATAAATAATAGCTACACCCTTGCTTATCAGAGTAGAGTTGGACCGGTGGAATGGTTAAGACCCTATACAGATGAGACCATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGTTGGCTGTTCCAATCAGTTTTGTCAGTGAGCATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGTATAGAAAAGTGGGGCCGTGTTCCTGCTCTAGGATGCGAACCTACCTTCATTTCTGATTTGGCAGATGCTGTTATTGAGAGTCTCCCGTATGTTGGTGCCATGGCAGCTTCATCAAACCTTGAAGCTCGACAGTCTCTGGTTCCGCTTGGCAGTGTAGAAGAGTTATTGGCAGCATATGATTCACAACGCAGGGAGTTGCCACCACCAGTTATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACATGGAATGGAAGAGTAGCTATGCTGGCTGTGCTTCTTCTTTTGTTTTATGAAGTCACTGCAGATAAGGGTCTTCTGCACCAGTTGGGAATATGGCCATCACTAATGTGA 1572 0.4097 MNSPIHTPSSASSSSSSSYMLRPPPCLTHASSNLKCPLLLPQTTSTLQKKYSCFGAHVEASFNTNPLKSYTSIRCSPNQSLKKQLFSVGSLATPTAQDVSDTTLIGDDKIAVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVARAPKSKEGYASIGGGSPLRRMTDAQAEELKKSLWAKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKSFDCPEEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKINNSYTLAYQSRVGPVEWLRPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMAASSNLEARQSLVPLGSVEELLAAYDSQRRELPPPVIVWEWGWTKSAETWNGRVAMLAVLLLLFYEVTADKGLLHQLGIWPSLM 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00240 523 Gene3D - 271 414 - -
Cca03g00240 523 SUPERFAMILY Chelatase 108 438 - -
Cca03g00240 523 TIGRFAM hemH: ferrochelatase 108 433 IPR001015 GO:0004325|GO:0006783
Cca03g00240 523 CDD Ferrochelatase_C 278 416 IPR033644 -
Cca03g00240 523 Pfam Ferrochelatase 109 432 IPR001015 GO:0004325|GO:0006783
Cca03g00240 523 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 53 447 - -
Cca03g00240 523 PANTHER FERROCHELATASE 53 447 IPR001015 GO:0004325|GO:0006783
Cca03g00240 523 Hamap Coproporphyrin III ferrochelatase [cpfC]. 108 433 IPR001015 GO:0004325|GO:0006783
Cca03g00240 523 CDD Ferrochelatase_N 110 272 IPR033659 -
Cca03g00240 523 ProSitePatterns Ferrochelatase signature. 299 320 IPR019772 GO:0004325|GO:0006783
Cca03g00240 523 Gene3D - 109 432 - -
Cca03g00240 523 SUPERFAMILY Chlorophyll a-b binding protein 478 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00240 Cca-Chr3 3536454 3542449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00240 K01772 - gmx:100785669 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00240 03 3536454 3542449 Cca03g00240 03 3536454 3542449 ECH
Cca09g02323 09 48543226 48549106 Cca03g00240 03 3536454 3542449 PCT