Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00204 ATGAACGATTTCGATGGTCTTTTAACCACCGATTTCGGGTTCAAACCCCAAGGCAAATCGGCGCCAATGGCCGCATCAAAAGCCTCATCCAAAACTTCCTCTCTCAACTTCGATTTAGGTTCCCGATCCACTCGCGCCTCCAATTCCTTCGCCGCCGCGGATTCCTTCGACGATCTCTTCGCCGCCCGCGCCAAACCGGACGCCTCCGTCAACTTGGACTCCGTCTTCCGCGACTCCAACGATTTCCGGTCCAAGTCCGTCAGCTCGGCGGCGTACGACAAACCTGTCTACGACGACGACATTTTCGACGGCGTTCCCGGCCTCAAGAGCTCCTCCAGTGTCTCCTACGACAACGTTTTCGCTCCGGGAGGGAGCGCCGCCTCGTTCGACGATCTTCTCGGCGGGTTAGGTAAATCGAAGAAGCCGGAGAAGGAGGAGAAAGGTGTCGCGGATTTTGACGACTTGATCCCTGGATTCGGGAGCCGTAAGGCCTCCACTGATAGGACCATTCCTGATATTGATTTGTCATCAGAACCTACTGTCAATGCTTCTAAAAATGCCTCCAGTGCAGAAGATCCTTTCAAAGTCTTTGAATCAACTTCAGTCCCAATGGATTCATCCTCGAGCTACTTTACAGATCCATTGGAAGAAATGAGTAATTTTACAAGTTCTAGAAGCACAAAAAAAGATAGCATTTCAAATTCTAATGGTGTAGTATATGATGATATTGATCCTTTTGGTGGACTTGGAAATTCAGTTCCTGCATTCTCAGCAGAGAGAAATAGCATGAAGGATAGCAGCTCCCCAACACCAACGTCAAATACAAGGTCAAGCTGGACAAGAGATGAAGAATCAAATGAAAAATCATCTGTGAGGAGTCCTGAGAGACGAACACAAAGCAAGATTCCTGTCGATCATGATCAGGAATTTCAGCAGGCTGCATTTGACATGCCTATATATTCATCTGATTCTTACAAACCAGTTGGCCAAAGGTCTACTTCCCCTTCATATGACAATGATGGTTTTAAACAGGCTAATATTCAGGCAGATATGTCTCCTAAATATGAAGAAAAGTTTGAATCAAATGATGATATATGGCTGATGGTATCGGAGATTCCTCTTTTCACTCAACCAACTGCTGCCCCACCACCTTCAAGACCACCTCCTCCTCGACCAGTACATATCCCAAAGTCGGGAGCGGGTTCATCCGCTTCTGCCAATGTCAGAAAGAAGGATAATGAATTTTCTTCTTTTCCAAGTTCCACTCAATTTTCTCAGGGCCCTAAATCTGCTCCTGCTGCAGCCAAGTTATCTTCTGCATCTCAGTTTGATGAACTTGAAGATTTTGCCACGGGCAGGAATCGTGGTAATGACGATGAACATGGAAATGGTCTTTCTGACGAAGAATTAGAGATGAACTCGGCTGCTGCAGCTATGAAAGAGGCTATGGATAGAGCTGAAGCTAAATTTAGGCATGCAAAGGAAGTTAGGGGGAGAGAGAATACAAAAGCTGCTAAAAGCAAGGAATCTGTGCAGTTGGAAAAGGATGGCAGATCTGTGTCAGAGGATAGAGAAAAACAAGAAAGGTTAGACCATGAACAACAGCAAAAGGAGAGAGAGGAAAAGGAACAAAGAAGACGTGAGAGGGAAAGGGAGGAGAAGGTAAGAGAGCAACAAAGACTTGAGAGAGAAATGGCAAGACATGCTGTAGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAGGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAAAGCGTGCTGAAAGGGCTGCAGTTCAGAGGGCACAAGCTGAAGCTCGTGAAAGGGCTGCTGCTGAGGCAAAGGAAAGGGCTGAAAAAGCTGCTGCAGAGGCAAAAGAGAGAGAAGTGCGGGAAAGAGCTGCAGCTGCAAGAGCGGAACCTGAAGCAAGAGTCAAAGCAGAACGTGCTGCAGTAGAAAGGGCTGCTGCAGAGGCCCGAGAAAGAGCTGCAGCACAGGCCCGAGAAAGAGCTGCAGCTGCTGCAAGGATGAACCAGCCACAGAATGACAATGATCTTGAATCATTCTTCAGCACGGGAGCACGAGCTAACAGTGCTCCAAGGCCTCCTAGACCCAGCACTTCAGATTCTCCAAATGTGTCTTCAAGCATGAAGAAAGCATCTTCATCCACTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGCTGCTCCATCATCATCTGGAGATTTTCAGGATGTTGAAGGGGAAAGTGAAGAAAGACGAAGAGCAAGGTTGGAACGCCACCAGAGGGCTCAAGAGCGTGCGGCTAAAGCATTGGCTGAGAAGAATCAACGGGACCTACAAAGTCAAAGAGAGCAAGCTGAGAGACATAGGGTTGCTGAAACATTGGATTTTGAAATTAAACGCTGGGCTGCAGGAAAAGAGGGGAATTTGCGTGCTTTGCTTTCCACCTTACAATATGTTCTGTGGCCTGAATGTGGTTGGCAGCCAGTTTCTTTGACTGATTTGATTACTGCTGCTGCTGTTAAAAAGGTTTATAGGAAGGCTACATTATGCATTCATCCTGATAAAGTACAACAGAAGGGAGCCAATATTCAACAGAAATATATTGCTGAGAAGGTTTTCGATCTACTAAAGGAAGCATGGAATAAGTTCAATTCAGAGGAGCTTTTCTAA 2712 0.465 MNDFDGLLTTDFGFKPQGKSAPMAASKASSKTSSLNFDLGSRSTRASNSFAAADSFDDLFAARAKPDASVNLDSVFRDSNDFRSKSVSSAAYDKPVYDDDIFDGVPGLKSSSSVSYDNVFAPGGSAASFDDLLGGLGKSKKPEKEEKGVADFDDLIPGFGSRKASTDRTIPDIDLSSEPTVNASKNASSAEDPFKVFESTSVPMDSSSSYFTDPLEEMSNFTSSRSTKKDSISNSNGVVYDDIDPFGGLGNSVPAFSAERNSMKDSSSPTPTSNTRSSWTRDEESNEKSSVRSPERRTQSKIPVDHDQEFQQAAFDMPIYSSDSYKPVGQRSTSPSYDNDGFKQANIQADMSPKYEEKFESNDDIWLMVSEIPLFTQPTAAPPPSRPPPPRPVHIPKSGAGSSASANVRKKDNEFSSFPSSTQFSQGPKSAPAAAKLSSASQFDELEDFATGRNRGNDDEHGNGLSDEELEMNSAAAAMKEAMDRAEAKFRHAKEVRGRENTKAAKSKESVQLEKDGRSVSEDREKQERLDHEQQQKEREEKEQRRREREREEKVREQQRLEREMARHAVERATREARERAAAEARQRAERAAVEKANAEARKRAERAAVQRAQAEARERAAAEAKERAEKAAAEAKEREVRERAAAARAEPEARVKAERAAVERAAAEARERAAAQARERAAAAARMNQPQNDNDLESFFSTGARANSAPRPPRPSTSDSPNVSSSMKKASSSTNIVDDLSSIFGAAPSSSGDFQDVEGESEERRRARLERHQRAQERAAKALAEKNQRDLQSQREQAERHRVAETLDFEIKRWAAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAAVKKVYRKATLCIHPDKVQQKGANIQQKYIAEKVFDLLKEAWNKFNSEELF 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00204 903 Coils Coil 523 651 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 134 343 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 758 800 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 377 395 - -
Cca03g00204 903 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 902 - -
Cca03g00204 903 SUPERFAMILY Chaperone J-domain 749 901 IPR036869 -
Cca03g00204 903 Gene3D DnaJ domain 772 902 IPR036869 -
Cca03g00204 903 MobiDBLite consensus disorder prediction 136 152 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 719 750 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 255 279 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 482 678 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 376 800 - -
Cca03g00204 903 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 902 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 325 343 - -
Cca03g00204 903 Coils Coil 767 802 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 280 304 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 688 706 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 13 33 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 170 238 - -
Cca03g00204 903 Coils Coil 653 680 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 400 429 - -
Cca03g00204 903 Coils Coil 465 496 - -
Cca03g00204 903 MobiDBLite consensus disorder prediction 448 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00204 Cca-Chr3 3052372 3064078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00204 - - gmx:100777111 754.207