Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00171 ATGCAGAATTTAATTTCAGTTGCTATTGTTTCCGTGTTGAGCCTTCTGGGTTTAGTTTCAACTGAGCCACTGACATGGAGATTGATTAAGGTCTGGCTGCCTGTGAATGTTATATTTGTTGGAATGCTCATTACAAGCATGTTTAGTTTGAAATACATTAATGTAGCCATGGTGACAGTCCTGAAGAATGTTACTAATGTCATAACTGCCCTTGGTGAAATGTACTTGTTCAAGAAACACCACGATGGCAGAGTCTGGGCAGCTCTGTTTCTAATGATCATTTCAGCAATAACTGGAGGGATTACTGATCTCTCTTTTAATGCAGTTGGTTATGCTTGGCAGACACTAAACTGTTTCTTAACTGCATCATATTCTCTGACCCTCCGAAGGGTCATGGATACAGCAAAGCAATTTACAAAATCTGGAAATTTGAATGAGTTTTCGATGGTCTTGTTGAACAACACCCTTTCTTTGCCTTTGGGAATTTTCCTGATTGTAGTTTTCAATGAGGTGGATTATCTCTTAACAACGCCACTTCTAAGATTGCCTAGCTTTTGGTTGGTGATGACTTTTAGTGGAATTTTGGGTTTAGCAATCAGCTTCACATCCATGTGGTTTCTTCATCAGACGGGAGCTACAACTTATAGTCTTGTAGGTTCACTCAACAAGATACCACTTTCTTTTGCTGGCATCCTTCTCTTCAAAGTTCCTACTAGTTTGGAGAACTCTGCTAGCATTTTCTTTGGTCTTCTGGCAGGAGTGTTTTTTGCAAGAGCCAAAATCCGGGAGAGGTCTCAATCTTGA 804 0.4005 MQNLISVAIVSVLSLLGLVSTEPLTWRLIKVWLPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITALGEMYLFKKHHDGRVWAALFLMIISAITGGITDLSFNAVGYAWQTLNCFLTASYSLTLRRVMDTAKQFTKSGNLNEFSMVLLNNTLSLPLGIFLIVVFNEVDYLLTTPLLRLPSFWLVMTFSGILGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSFAGILLFKVPTSLENSASIFFGLLAGVFFARAKIRERSQS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00171 267 SUPERFAMILY Multidrug resistance efflux transporter EmrE 19 97 - -
Cca03g00171 267 Pfam Triose-phosphate Transporter family 6 255 IPR004853 -
Cca03g00171 267 PANTHER - 2 263 - -
Cca03g00171 267 PANTHER SOLUTE CARRIER FAMILY 35 2 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00171 Cca-Chr3 2616480 2621397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00171 2 215 Organic Solute Cotransporters AT2G13650 84.112 4.46e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00171 K15356 - gmx:100808480 485.723