Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00148 ATGGGAGCGTCCACTTCGGCGGAGCCGAGGGTTTCGGCGGAACAGCACGAGGCGGAAGCCGTCGCAGGCTCCACTGGAGCTCTTCCAATGCTTCAGAAAGCGTTCTCCAAGCTCGCCAATCCCGAGACAAACACCGTTCCCTTAGAAAATCTACAGCAATGCTTTAGTTTCGGTCCAAGTTATTCCGGAAACAGCGTGCCTGATTCGTTTCCGGTGTTGTTGGATCACCTAGGCTCGTCCCTAGTGGGTCAATTTTTCGTGCCTGACAAAGGGGGAATAAACTGGGTTGAATTTGTGAAAGGTTATAACAAGTGCTGTGCTAGGGTGTCTGCTTCGGTTTCGCTGAACATGCTTGTAAGAGTGTTCGTTGCTATCTCACAAAGTGCGAAAGTGCCTCTGCATTTGGAGTTTGAATCCGGGGATGATGATTGCAAGATTAACGGGCACCTTCTTCCCAATCACGTGTTTCTGCTTCTTTCCGTGTGTTGGGTTATGTCGTGGGGCTCTAGAAACTTGAAAGGGGAAGGGAATCTCGGTCTACCGGATCTGAATCATTTTTTATTGTCGGTGATCACATCGTGTGCTGGAGTTGACAGTGGTTTGAATGTGTGGGATTGTGATATCTCCAGCTTGGAGGTTCAGCTTCCTGCGGGCAAGTTTGTTACATGGGTTATGAGTACCGTGCCGTGCCTCCCGGATTGCTTAAGGCAGTATTTTCATGCTAGACTGCAAATGGCTGCATCTGCCGGGGCTGAATTAGCATCCTCTAGTTCCTCCTCTGTTGGAGATATTTCATCAACAGCTGCATATGATTATATTTTGACCCAAGGAAGGGCATGGGCAATTTCTATTACACAGAGAAGTGCAGTAAATGAAGAGATTTCTAGAGCATTTATAAGTAGTGGAGGTGGAATGGATGATATCCTTATTTATCGGTCATCATCTCATGGAAGAGGACTTGGCAGATTTTGGTCTCATGTTGAAGGTTACAAAGGTCCTTTGTTAATTTTGATAGCTGCAAGTTCAGGAGATGCCCAGGAGGAAAATTCCATCAATAGGAAATGGGTTATAGGTGCCTTAACAGATAAATGTTTTGAAAATAAAGATATCTTCTATGGAAACTCTGGATATTTATATTCTATTAGCCCAGTGTTTCATGCATTTCCACCTACTGGTAAGGAAAAGAATTTTGTTTATAGCCACTTGCATCCTACTGGTAAAGTATACCAACCACGGCCAAAGCCAGTTGGAGTTGCATTTGGAGGAACTCTGGGAAATGAGAGAATATTTATAGATGAAGATTTTGCAAAAGTGACCATTCGCCATCATGCTATTGACAAAACCTACCATAGTGGATCCCTCCTTCCGGATCAGGGTTTCCTACCTGTTGATGGTCTGATTTCAGAAGTTGAAGTTTGGGGTCTTGGTGGGAAAGTAGCAAAGGAAGTGCAAAACTCTTACAAGAAGAGGGAAGAACTTTTCACTGAGCAAAGAAGAAAAGTTGACTTGAAGACATTTGCAAATTGGGAGGATTCACCTGAGAAAATGATGATGGACATGGTGTCTGATCCAAATGCTGTTCGAAGGGAAGACCGTTGA 1599 0.4459 MGASTSAEPRVSAEQHEAEAVAGSTGALPMLQKAFSKLANPETNTVPLENLQQCFSFGPSYSGNSVPDSFPVLLDHLGSSLVGQFFVPDKGGINWVEFVKGYNKCCARVSASVSLNMLVRVFVAISQSAKVPLHLEFESGDDDCKINGHLLPNHVFLLLSVCWVMSWGSRNLKGEGNLGLPDLNHFLLSVITSCAGVDSGLNVWDCDISSLEVQLPAGKFVTWVMSTVPCLPDCLRQYFHARLQMAASAGAELASSSSSSVGDISSTAAYDYILTQGRAWAISITQRSAVNEEISRAFISSGGGMDDILIYRSSSHGRGLGRFWSHVEGYKGPLLILIAASSGDAQEENSINRKWVIGALTDKCFENKDIFYGNSGYLYSISPVFHAFPPTGKEKNFVYSHLHPTGKVYQPRPKPVGVAFGGTLGNERIFIDEDFAKVTIRHHAIDKTYHSGSLLPDQGFLPVDGLISEVEVWGLGGKVAKEVQNSYKKREELFTEQRRKVDLKTFANWEDSPEKMMMDMVSDPNAVRREDR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00148 532 ProSiteProfiles TLDc domain profile. 280 476 IPR006571 -
Cca03g00148 532 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 519 - -
Cca03g00148 532 SMART 109ultra 287 476 IPR006571 -
Cca03g00148 532 Pfam TLD 309 476 IPR006571 -
Cca03g00148 532 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 519 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00148 - - gmx:100786867 931.398