Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00119 ATGTCTTCTGTAAGCAAGGGTGATAGGAAGGCCTCCCTTGATGCAGCATCGTGGTTGTTCAACGTGGTCACGTCTGTGGGAATAATCCTTGTGAATAAAGCCTTGATGGCTACGTATGGTTTCAGTTTTGCTACAACTTTAACTGGTCTGCATTTTGCCACGACAACCTTGTTGACGTTCATTCTTAAATCGCTGGGATATATCCAGACATCCCATCTTCCATTCTCTGATATAATCAAATTTGTCCTGTTTGCGAATTTCTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTTGGTTTCTATCAGATTGCTAAGCTGAGCATGATTCCAGTATCTTGTTTCCTGGAGGTTGTCTTGGACAATGTGCGATATTCAAGGGATACAAAGCTTAGTATTGTTTTGGTTTTGCTTGGCGTTGCTGTCTGTACAGTGACTGATGTCAGTGTTAATACAAAGGGTTTCGTGGCTGCTGTAATTGCAGTTTGGAGCACAGCCCTGCAACAATATTATGTGCATTTTCTTCAGAGAAAATATTCTATTGGGTCATTTAACTTGTTGGGCCACACTGCACCGGCACAGGCAGCCAGTTTACTGCTAGTAGGTCCTTTTCTGGACTATTTTTTGACAGGCAAACGAGTTGATGCCTACGACTATGGTTTCACATCCACATTGTTCATCATTCTGTCTTGCACTATCGCAGTAGGGACAAACCTCAGCCAGTTCATCTGCATTGGTAGGTTCACGGCTGTAACATTTCAAGTCCTGGGTCACATGAAGACTATTCTGGTCTTGATATTAGGATTCATTTTCTTTGGAAAAGAGGAGCGTCGTAGCTTTTCCCTTCCCAAAACACAAGAATATAGTGCAGTACCCGTGTCCTCTGAACCAGATACGAAGGAATAG 912 0.4265 MSSVSKGDRKASLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTFILKSLGYIQTSHLPFSDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSIVLVLLGVAVCTVTDVSVNTKGFVAAVIAVWSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFLDYFLTGKRVDAYDYGFTSTLFIILSCTIAVGTNLSQFICIGRFTAVTFQVLGHMKTILVLILGFIFFGKEERRSFSLPKTQEYSAVPVSSEPDTKE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00119 303 PANTHER SOLUTE CARRIER FAMILY 35 7 278 - -
Cca03g00119 303 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 278 - -
Cca03g00119 303 Pfam Triose-phosphate Transporter family 24 276 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00119 Cca-Chr3 1670116 1675583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00119 24 274 Organic Solute Cotransporters AT3G10290 23.864 2.93e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00119 - - gmx:100800306 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00119 03 1670116 1675583 Cca03g00119 03 1670116 1675583 ECH