Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00107 ATGGAAGCCTTAGAGGAACAAAACCATCAACTCACTGATGAGCTTACACAAATGAAAGCACAAATGGCCATGATGCTCGAAGCCATGCAAAAGCTCCAACCCAATGAAGAAGGGGCAAGTAGCGTGGGGGCAAATTCCAAGGACCATCTGAATGCCTTGAAGGAAAGGTTAAGGTGCCCCCATTGTGACCCCGCCGCCGCGCGATGGGAGCGCGTGCCCAGCCCCGCCGAGATGCGGGAGAAGTGGATGCACGCCAGCGCCGTCGTCGGCGACACCGTCTACGCCATGGCGGACCGTGGCGGCATCGCGTTCCGCCCTCGCATCGGCGCGTGGGAGAGCGTGGGGGGAGAATTGGATCTCGGGTGGCGGGGGAGGGCGTGCGTGGTGGAGGGGGTTTTGTACTGTTACGACTATCTGGGGAAAATCAAAGGGTTCGATGTGGGGCGCGGGGTGTGGGAGGAGCTGAAGGGGTTGGAGAAGGGTTTGCCGAGGTTTCTGTGTGGGGCTACCATGGCTGATTTGGGTGGGAAATTGTGTGTGGTTTGGGAGTGCCAAGGGAGTAGTGGGAAAGAAATTGAGATTTGGTGTGCCGAGATTGGGGTGAAGAAGAATCCTGATGGGGAATTGTTGGGTCAACTTGGTTGGTTCGGGAAGGTTCTTTCTCTTCCCAAAGGCTCCTCCATTGTTCACTGTTCTTCTGTTGCTGTGTGA 711 0.5668 MEALEEQNHQLTDELTQMKAQMAMMLEAMQKLQPNEEGASSVGANSKDHLNALKERLRCPHCDPAAARWERVPSPAEMREKWMHASAVVGDTVYAMADRGGIAFRPRIGAWESVGGELDLGWRGRACVVEGVLYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMADLGGKLCVVWECQGSSGKEIEIWCAEIGVKKNPDGELLGQLGWFGKVLSLPKGSSIVHCSSVAV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00107 236 Coils Coil 1 28 - -
Cca03g00107 236 SUPERFAMILY Kelch motif 62 201 IPR015915 GO:0005515
Cca03g00107 236 Gene3D - 40 202 IPR015915 GO:0005515
Cca03g00107 236 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 68 219 - -
Cca03g00107 236 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 68 219 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00107 63 220 Miscellaneous Gene Families AT4G33900 33.735 2.97e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00107 - - ccaj:109795957 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00107 03 1479794 1481125 Cca03g00107 03 1479794 1481125 ECH