Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00102 ATGCAAAGTTCCCTTCGATTCCAAGCTTCGAACCCAGGCTTCGTTGTTCCGCACACGAAGCACGCTTTTGCCACCAACATTGTCTCACTCCGTACCCTCCCCTTCACCAAACGCCGTTCCCTTCCCCAACCCCTGTGCTCCCTGTCCGTACAACCCTCGCAGCACACCTCCACCGTTGGATCGCCGTCGCTTCAACACTGGAACCTCACCAGTCGCCACGTCACCGCTCTCAACGTCTTCGCCTGTGCGACGGCGATATGTGCAACGTGGCTGTTTTGCTCTGCGATTCCGGCGCTTCTGGCTTTCAAGAGAGCAGCAGAATCGATGGAGAAGCTGATGGATGCCACGAGGGAGGAACTTCCCAACACCATGGCCGCAATTCGATTATCCGGCATGGAAATCAGTGACTTAACCACTGAGCTCAGTGATATAGGCCAAGAGATTACGCAAGGTGTTAGAAGTTCCACTCGTGCAGTTCGGTTGGCAGAGGAGAGGCTTCGCCGCTTGACTACTGTGCCTTCTTCTTCTTCTTCAGCTTCGTTGCAGGGGAAGATCAATCTGAAAGCTGAGGATGATGGGCCTGTGATAGCCAGAACCGCGAGGGGGGTAAGAGAGGGTATTCTCAAGGGTCGTGCTATTTTGCAAATGTTTTTCACACTCACCCGATTTTCGAGGTTTGCTCTCAACTTTATCACTGGTCGTAGAAAATTATCAAGCTAG 720 0.5278 MQSSLRFQASNPGFVVPHTKHAFATNIVSLRTLPFTKRRSLPQPLCSLSVQPSQHTSTVGSPSLQHWNLTSRHVTALNVFACATAICATWLFCSAIPALLAFKRAAESMEKLMDATREELPNTMAAIRLSGMEISDLTTELSDIGQEITQGVRSSTRAVRLAEERLRRLTTVPSSSSSASLQGKINLKAEDDGPVIARTARGVREGILKGRAILQMFFTLTRFSRFALNFITGRRKLSS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00102 239 PANTHER TRANSMEMBRANE PROTEIN 1 236 - -
Cca03g00102 239 Coils Coil 99 119 - -
Cca03g00102 239 PANTHER CHITINASE-LIKE PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00102 Cca-Chr3 1449779 1452080 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00102 - - gmx:100792910 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g00102 03 1449779 1452080 Cca03g00102 03 1449779 1452080 ECH