Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00091 ATGGAAGACCGAGGTTACACTTTAGATGGCACAGTGGATCTTAGTGGACGCCCCGTGCTTTCTTCTTCAACTGGGAAACGGAAAGCTTGCGCTTTCATTCTTGCTTACCAAGCATTTGAAAGATTTGCCTACTTTGGGGTAAGTGCGAATTTGGTGATTTATATGACATCAGAACTCCACAAAGACTTGGTATCATCAGTGACCGGTGTCAATTACTGGTCAGGCACTGCATGGATAACTCCAGTACTTGGTGCTTACTTAGCAGATTCTTTCTTAGGTCGCTTCTGGACAATCACTTTTGCCTTGCTCATATATGCCATAGGAATGGGGCTTCTGGTAATTACTACTTCACTGAGGTGCTTCAGAACAGTGTGTACAAATGGAATTTGCAGAGAAGCATCATCCTTAAGGCAAACATTGTTCTATTTATCGATATACACCATAGCAATTGGCAGTGGCGTACTGAAGCCAAATATGTCAACTTTTGGTGCTGACCAATTTGACGACTTCAAACTCAAAGAAAAAGAGCTAAAAGTTTCATTCTTCAACTGGTGGTCCTTTAACACTTCCTGTGGCACTTTGGCAGCCACTTTGTTTGTTGTGTACATTCAAGAGAGATTTGGATGGGGACTGGGGTATGGCATATCATCAATTGGTTTTATGCTTGCCTCTTTTACCTTCTTTATGGGCGTCCCAATATATAGGCACAAATCCAGACAGGGAAAGAGCCATGCAGAAGAGTTTTTCAGAGTCCCGGTTGTTGCTTTCAGAAATAGAAAGCTTCAGCTTCCTAGTAGCCCTTCAGAACTGCATGAGTTGGAGTTGGAACACTACAATGATAGTGGAAAACGACAAATTTATCACACTCCTCGTTTCAGGTTCTTAGACAAGGCTGCTATAAAAGAAAGCAAAGAAGGGACCACAAACCCCCCATGCACAGTGAGTCAAGTAGAGACAAACAAGCTTATCTTAGGGATGCTTGTAATATGGTTACTAATCATAATTCCAAGCAACTTCTGGGCAGTGGAAGTAACAGTGTTTGTGAAGCAAGGTACAACAATGGAAAGAAACCTTGGCCCCAACTTCAAAATACCAGCAGCCTCCCTTTGGAGTTTTGTAGTGGCTACCATGCTTATTTGTCTCCCCATTTATGATCACTACTTTGTGCCATTCATGCGTAGAAGAACCGGCTACCACAGAGGAATCAAAATGCTTCAGAGAATTGGCATAGGAGTTGCCATCCAAGTCATAGCAGCTGCAGTTATGTATGCTGTTGAAATTCTTAGAATGAATGTCATAAAGAAGAAACACATAGTTGGAGCTGAAGAAATAGTTCCTATGAGCATATTCTGGCTCTTGCCTCAGCATGTTCTACTTGGCTTTGCAAACACATTCCTTATGGCTGGATTGCTAGAATTCTTCTATGATCAGTCACCAGAAGAAATGAAAGTCCTTGGCACAGCCTTCTACACTAGCACCATAGCTGCTGGGAAATATTCTAACAGTTTGCTAGTGACTGCGATAGATAAATTTACAAGGAAAATAAGTGGTAAAAGCTGGATTGGCAACAACCTGAATGATTGCCACCTTGATTACTATTATGCTCTTCTTTTTGTGATTTCTGCGCTTAATTTTGGGGTCTTTCTGTGGGTGTCAAGTGGATACGTTTACAAGAAAGAAAGTACAACAAAGGTGAATGATATTGAGATTTTGAGAGAAATGCAAACAGAAACACTGGTTGGAAAAGCTTGA 1752 0.4144 MEDRGYTLDGTVDLSGRPVLSSSTGKRKACAFILAYQAFERFAYFGVSANLVIYMTSELHKDLVSSVTGVNYWSGTAWITPVLGAYLADSFLGRFWTITFALLIYAIGMGLLVITTSLRCFRTVCTNGICREASSLRQTLFYLSIYTIAIGSGVLKPNMSTFGADQFDDFKLKEKELKVSFFNWWSFNTSCGTLAATLFVVYIQERFGWGLGYGISSIGFMLASFTFFMGVPIYRHKSRQGKSHAEEFFRVPVVAFRNRKLQLPSSPSELHELELEHYNDSGKRQIYHTPRFRFLDKAAIKESKEGTTNPPCTVSQVETNKLILGMLVIWLLIIIPSNFWAVEVTVFVKQGTTMERNLGPNFKIPAASLWSFVVATMLICLPIYDHYFVPFMRRRTGYHRGIKMLQRIGIGVAIQVIAAAVMYAVEILRMNVIKKKHIVGAEEIVPMSIFWLLPQHVLLGFANTFLMAGLLEFFYDQSPEEMKVLGTAFYTSTIAAGKYSNSLLVTAIDKFTRKISGKSWIGNNLNDCHLDYYYALLFVISALNFGVFLWVSSGYVYKKESTTKVNDIEILREMQTETLVGKA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00091 583 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 11 567 - -
Cca03g00091 583 CDD MFS_NPF5 28 557 IPR044739 GO:0042937|GO:0042938|GO:0071916
Cca03g00091 583 Pfam POT family 95 521 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca03g00091 583 Gene3D MFS general substrate transporter like domains 2 565 IPR036259 -
Cca03g00091 583 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 567 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca03g00091 583 SUPERFAMILY MFS general substrate transporter 23 551 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00091 Cca-Chr3 1280947 1284448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00091 6 564 Organic Solute Cotransporters AT2G40460 57.245 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00091 - - gmx:100789214 993.03