Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00090 atggaaacggagggggaaagaCCCCCACTTCCGCAACACGAAGGCCACACAAAGCCCCTCTCAAGGCTCAACAACTACGTCGCCAAAAGCAGAGTAGGGAAATGGTTCAAGCTATCCCACCGGAACTCCACCTTCACCACGGAGCTCCGCGCGGGCACCGCCACCTTCCTGACCATGGCCTACATACTGGCCGTGAACGCCTCCATCCTGGCAGACTCCGGGGGGACCTGCTCCGTGTCGGACTGCCTCCCACTCTGCTCGGAGGCCTCCCTACCTCCCTCGGCCTGCAGCGGGCCCTCCCACCGCCTCCTGCCCCCGGACGAGTCATGCAAGTTCAACCCGGTGAATCCCGGGTACGCCTCCTGCCTCGAAAACACGCGGAAGGACCTCATCGTGGCTACCATAGCTTCTTCCCTCATTGGCTGCTTCATCATGGGGACCTTCGCCAATCTCCCTCTCGGCCTCGCCCCGGGCATGGGCTCCAACGCCTACTTCGCCTACACCGTCGTCGGCTTCCACGGCTCCGGCAACGTCTCCTACCAAAGCGCCCTCGCCGCGGTCTTCATCGAAGGGACCATCTTCCTCCTCGTCTCCGCCATCGGCCTCCGCGCCAAGCTCGCCAAACTCGTCCCCAAGCCCGTTAGAATAAGCTCCTCCGCCGGAATCGGGCTTTTCTTAGCCTTCATCGGCCTTCAAAACAACCAAGGAATCGGGCTCGTCGGGTTCAGCCCATCCACTTTAGTCACCCTCGGCGCCTGTCCAACCTCCTCCCGGGCTTCCCTGGCCCCTGTCTTAACGGCTGCTAACGGGACCGTTAGTTTATTACCCGGCGGGACGGTTTCCGGGGATATCCTCTGCCTTAGAGACAGAATGGAAAGCCCCACACTCTGGCTGGGCCTGGTGGGCTTTGTCATAATCGCCTACTGTCTGGTGAAGAATGTTAAAGGCGCTATGATATACGGCATCGTTTTCGTCACCGTGGTGTCGTGGTTTCGGAATACGAAAGTGACGGCGTTTCCAAACACGGAGGCGGGTAACTCGGCGCACGAGTATTTCAAGAAGGTGGTCGACGTTCACACCATAAAAACCACCGCGGGGGCGTTGAGCTTTAAGAATATAAACAAAGGGTATTTTTGGGAGGCCGTGGTGACTTTTTTGTACGTGGACATTCTCGACACCACCGGAACGTTGTACTCCATGGCCCGCTTCGCCGGCTTCACCGACGAGAAGGGGAATTTCGAGGGGCAATACTTCGCCTTCATGTCGGACGCCACGTCCATCGTGGTGGGGTCGCTGCTGGGGACCTCGCCGGTGACGGCGTTCATTGAATCCTCGACGGGGATACGCGAGGGCGGGAGGACCGGGTTGACGGCGCTGACGGTGGCGGCGTATTTCCTTCTGGCGTTGTTCTTCACGCCGCTGCTGGCGTCGATTCCGGCGTGGGCGGTGGGGCCGCCGTTGATTCTGGTGGGGGTTTTGATGATGAGATCGGTGGTGGAGATTGATTGGGAGGACATGAGGGAAGCGATACCAGCGTTCGTGACCCTCATTCTGATGCCGTTGACGTATTCGATCGCTTATGGGCTTATCGGTGGGATTGGGACTTACATTGTGTTGAACCTTTGGGATTGGGGGTGGGGGCTCTTGCAGCACTTTGGGGTGGTCAAAATGAAAACCACGGATGATGGGGTTCTCGTACTTCAAAATCAACCTTCTCCACAAAATCCAACTGCTAAACCACTCCAACTACAACCTTAG 1758 0.5768 METEGERPPLPQHEGHTKPLSRLNNYVAKSRVGKWFKLSHRNSTFTTELRAGTATFLTMAYILAVNASILADSGGTCSVSDCLPLCSEASLPPSACSGPSHRLLPPDESCKFNPVNPGYASCLENTRKDLIVATIASSLIGCFIMGTFANLPLGLAPGMGSNAYFAYTVVGFHGSGNVSYQSALAAVFIEGTIFLLVSAIGLRAKLAKLVPKPVRISSSAGIGLFLAFIGLQNNQGIGLVGFSPSTLVTLGACPTSSRASLAPVLTAANGTVSLLPGGTVSGDILCLRDRMESPTLWLGLVGFVIIAYCLVKNVKGAMIYGIVFVTVVSWFRNTKVTAFPNTEAGNSAHEYFKKVVDVHTIKTTAGALSFKNINKGYFWEAVVTFLYVDILDTTGTLYSMARFAGFTDEKGNFEGQYFAFMSDATSIVVGSLLGTSPVTAFIESSTGIREGGRTGLTALTVAAYFLLALFFTPLLASIPAWAVGPPLILVGVLMMRSVVEIDWEDMREAIPAFVTLILMPLTYSIAYGLIGGIGTYIVLNLWDWGWGLLQHFGVVKMKTTDDGVLVLQNQPSPQNPTAKPLQLQP 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00090 585 PANTHER XANTHINE/URACIL PERMEASE C887.17-RELATED 15 563 IPR045018 GO:0015205
Cca03g00090 585 Pfam Permease family 124 528 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cca03g00090 585 PANTHER ADENINE/GUANINE PERMEASE AZG1 15 563 - -
Cca03g00090 585 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00090 Cca-Chr3 1252056 1254517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00090 K06901 - gmx:100788148 1028.85