Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00085 ATGGGGGAGGGAGAACGTTTTCAGCTGGGGACGGTGGGCGCGTTGACTCTTTCTGTGGTCTCATCCGTGTCGATCGTAATTTGCAACAAGGCGTTGATGAGTTCACTGCATTTCATTTTTGCTACAACTTTGACCAGCTGGCATCTGCTTGTCACATTTTGTTCCCTTCATGTGGCGCTCAAAATGAGATTCTTTGAGCACAAACCTTTTGAGCAGAAAGCTGTAATGGGATTTGGGATTTTAAATGGGATCTCAATTGGACTTCTAAATTTGAGCCTGGGGTTCAATTCTGTTGGCTTCTATCAGATGACTAAGCTGGCAATCATTCCTTGTACTGTACTGTTGGAGACCATTTTTCTTGGGAAGAGATTCAGTAAGAGAATTCAATTTGCCCTTAGTATCCTCCTTCTGGGTGTTGGGATTGCTACTGTCACAGATTTGCAGCTCAACGCTTTGGGCTCTTTCTTGTCTCTGCTTGCAGTGATTACAACTTGCATTGCTCAGATTATGACAAATACTATCCAGAAGAAGTTCAAGGTTACTTCCACCCAGCTTCTGTATCAATCATCCCCATATCAGGCAGCAACCCTGCTAATCTCTGGTCCATATCTGGATAAACTTTTGACCAACCAAAATGTATTTGGTTTCAAGTACACAACACAAGTGACGGTCTTCATAGTTCTTTCCTGCCTTATCTCCATCTCTGTCAATTTTAGTACGTTCCTTGTTATTGGAAAGACATCTCCAGTTACCTATCAGGTTCTTGGACACCTGAAGACATGCCTTGTATTGGCATTTGGTTATATACTACTCCAAGACCCATTTAGCTGGAGAAACATACTGGGTATTTTGATAGCCATGATTGGGATGATTCTATATTCCTACTATTGCACTCTGGAGAATCAGCAAAAAGCTGTTGATGCTGCAGCACAAGCATCCCAGGCAAGAGAAGGTGAATCTGATCCTCTGGTTAATGTGGAAAATGGAAGTGCAGTTATGAGTGATACTGTTGGACAAAGACAAATGTCACCTGTGTGGAGCAAGAGCAAGGACTAG 1056 0.428 MGEGERFQLGTVGALTLSVVSSVSIVICNKALMSSLHFIFATTLTSWHLLVTFCSLHVALKMRFFEHKPFEQKAVMGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETIFLGKRFSKRIQFALSILLLGVGIATVTDLQLNALGSFLSLLAVITTCIAQIMTNTIQKKFKVTSTQLLYQSSPYQAATLLISGPYLDKLLTNQNVFGFKYTTQVTVFIVLSCLISISVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYILLQDPFSWRNILGILIAMIGMILYSYYCTLENQQKAVDAAAQASQAREGESDPLVNVENGSAVMSDTVGQRQMSPVWSKSKD 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00085 351 MobiDBLite consensus disorder prediction 318 351 - -
Cca03g00085 351 PANTHER SOLUTE CARRIER FAMILY 35 3 325 - -
Cca03g00085 351 Pfam Triose-phosphate Transporter family 20 294 IPR004853 -
Cca03g00085 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 294 - -
Cca03g00085 351 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 3 325 - -
Cca03g00085 351 MobiDBLite consensus disorder prediction 327 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00085 Cca-Chr3 1204243 1208334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00085 1 325 Organic Solute Cotransporters AT1G21870 24.412 8.29e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00085 K15285 - gmx:100786018 596.275