Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g00076 ATGCTGCTACTTATTGTTTTGGGGGTGGAAGTCCAGGGTCAACTGGTTCCTGATCAGAAGACATTTCCATCAGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGCTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACTGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAACTGTAACAATCTGGGCATCCCTCCGAAAAAACGATACCCACCTATGCGTGATGCTCTCAATGCAACTGGGCGTAAAATATTCTATTCACTCTGTGAATGGGGTGTTGATGACCCTGCCTTGTGGGCAGGCAAGGTGGGTAACAGTTGGCGCACAACTGATGACATCAATGATACATGGGCAAGATATAGCATTCAGAGGGATAAAACAGAATTTGTGGGGTCAAATCGTCGTTGGTTGTTACTGGCTTGGAATTTTGCTTTTGTCAATTGTTTTCTATTAACCAGTGATCTAGTAGCATGA 540 0.4315 MLLLIVLGVEVQGQLVPDQKTFPSGIKALADYVHGKGLKLGIYSDAGAFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCNNLGIPPKKRYPPMRDALNATGRKIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWARYSIQRDKTEFVGSNRRWLLLAWNFAFVNCFLLTSDLVA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g00076 179 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 11 150 IPR002241 GO:0004553|GO:0005975
Cca03g00076 179 PANTHER ALPHA-GALACTOSIDASE 11 150 - -
Cca03g00076 179 CDD GH27 12 141 IPR002241 GO:0004553|GO:0005975
Cca03g00076 179 SUPERFAMILY (Trans)glycosidases 13 151 IPR017853 -
Cca03g00076 179 PRINTS Glycosyl hydrolase family 27 signature 91 109 IPR002241 GO:0004553|GO:0005975
Cca03g00076 179 PRINTS Glycosyl hydrolase family 27 signature 64 81 IPR002241 GO:0004553|GO:0005975
Cca03g00076 179 PRINTS Glycosyl hydrolase family 27 signature 30 51 IPR002241 GO:0004553|GO:0005975
Cca03g00076 179 Gene3D Aldolase class I 8 167 IPR013785 -
Cca03g00076 179 Pfam Alpha galactosidase A 11 144 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g00076 Cca-Chr3 1123311 1124724 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g00076 25 147 Glycoside Hydrolase AT3G56310 82.927 1.97e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g00076 K07407 - gmx:100784072 263.848