Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02759 ATGTTCGATGTCTCTCTCTTTCTACGTCACAACTTTGCTCGGGTATGGGCTTCTGCCTCAGAGAAACTCACTTCTCTTGAGATTGGCTACATTTCTTCAGTTACAGTGACGGAACTGCTTAGCCCAAATTTGGGAGCCCATCTGCCCTCAAATCCTGTTCAACCATCCATACTTCCTAGCATTCAGAAACTATGTCTTAATGTAGACTATATAACGGATGCTATGATTGGTACAATATCCAAGGGTCTCGTCCTTTTGATTCATTTGGATCTTCAAGATGCACCACTGATTGAACCTAGAATTACATTTGACCTAACCAATGCTGGTCTTCAACAAATTAATCAGCTTGGGAGATTGAAACATCTTTCATTGGTTCGAAGTCAAGAGTTCCTGATTACGTACTTTCGAAGAGTGAATGATTTGGGATTACTTCTAATGGCTGACAAGTGTGCAAACTTGGAGAGTATATGCCTTGGTGGCTTTTGTCGTGTCACAGACACGGGCTTCAAAACTATCCTGCATTCTTGCAGTCGCTTATACAAGCTTAAGGTCACTCATGGGACTCATTTAACTGATCTAGTTTTTCATGATATTTCCGCAACATCCCTTACTTTAACACATGTTAGCTTAAGACGGTGCAATCTGTTAACTAATCACGCTGTTTTGAGTTTGGCATCAAACAAGGAGCTTAAAGTTCTTGACTTGAGAGACTGCAGGAGCCTTGGGGATGAAGCTCTCCAGGCCATTGGCACTCTTCCAAGACTGAAAATTTTACTATTAGATGGTTCCGATATAACTGATGCAGGACTTTTGTACTTAAGATCATCTGTAATTAGTTCACTGTATGCGTTGTCTCTTCGAGGGTGCAAGAGACTTACAGATAAATGCATCACAGCTCTATTTAATGGCTGCTGTGTGCTGGAATTGCGAGAACTGGACCTATCTAATCTTCCTAACCTCTCAGATAATGGAGTTCTGCTGCTGGCAAAGAGTCGGATTCCCTTTTTCGAACTCCGGATGCGACAGTGCCCTCTAATCGGTGATACTGCAGTCATGGCATTAGCTTCAATGCTGGTTGATGACGCCAGACATGGAAGTAGTTTGCGTTTGTTGGATCTTTATAACTGTGGTGGCATTACTCCGCTTGCATTTCGCTGGTTGAAGAAACCATATTTTCCAAGGCTCAAATGGTTGGGAGTGACAGGAAATGTTAATAGAGACATGGTAGATGCTTTAGCCAGAAGCAGACCTTTCTTACATGTGGCATGCCATGGTGAGGAGCTTGGGGCTGATCCCTATGATACCTCAGATGGGTTATATACACACGATTATGATGACGTGGATGAATTTGAGCAGTGGCTTCTTGAAGCAGATATTGATAGTGACTATGAAGAGGTGGGCGATGCTGAAAATAATGACGAAATGGTTGTGTAA 1434 0.4254 MFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGAHLPSNPVQPSILPSIQKLCLNVDYITDAMIGTISKGLVLLIHLDLQDAPLIEPRITFDLTNAGLQQINQLGRLKHLSLVRSQEFLITYFRRVNDLGLLLMADKCANLESICLGGFCRVTDTGFKTILHSCSRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKELKVLDLRDCRSLGDEALQAIGTLPRLKILLLDGSDITDAGLLYLRSSVISSLYALSLRGCKRLTDKCITALFNGCCVLELRELDLSNLPNLSDNGVLLLAKSRIPFFELRMRQCPLIGDTAVMALASMLVDDARHGSSLRLLDLYNCGGITPLAFRWLKKPYFPRLKWLGVTGNVNRDMVDALARSRPFLHVACHGEELGADPYDTSDGLYTHDYDDVDEFEQWLLEADIDSDYEEVGDAENNDEMVV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02759 477 SUPERFAMILY RNI-like 139 405 - -
Cca02g02759 477 PANTHER UNCHARACTERIZED 45 401 - -
Cca02g02759 477 SMART LRR_CC_2 202 227 IPR006553 -
Cca02g02759 477 SMART LRR_CC_2 150 175 IPR006553 -
Cca02g02759 477 SMART LRR_CC_2 337 357 IPR006553 -
Cca02g02759 477 SMART LRR_CC_2 278 303 IPR006553 -
Cca02g02759 477 SMART LRR_CC_2 228 252 IPR006553 -
Cca02g02759 477 SMART LRR_CC_2 365 390 IPR006553 -
Cca02g02759 477 SMART LRR_CC_2 306 331 IPR006553 -
Cca02g02759 477 PANTHER RNI-LIKE SUPERFAMILY PROTEIN-RELATED 45 401 - -
Cca02g02759 477 Gene3D Ribonuclease Inhibitor 4 440 IPR032675 -
Cca02g02759 477 Pfam Leucine Rich repeat 227 249 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02759 - - pvu:PHAVU_007G016400g 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02759 02 49071034 49073956 Cca02g02759 02 49071034 49073956 ECH