Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02749 atggagtgcagtgatgctgaaTATGTGGCACTGGGAGGAGAAGGTTCTTCTCCAAAGCTAGAGAAGACTAGGAAGGTTTCAATTATCCCTTTGATCTTTTTGATCTTCTATGAGGTCTCAGGAGGACCTTTTGGCGTGGAAGACACTGTCAGAGCAGCTGGTCCATTCTTGGCTCTCATTGGTTTCTTGGTTTTCCCATTCATATGGAGTGTTCCAGAGGCACTCATAACTGCAGAAATGGCCACCATGTTCCCAGAGAATGGTGGCTATGTGGTTTGGGTTTCATCTGCATTGGGTCCTTACTGGGGTTTCCAACTTGGTTGGATGAAATGGCTTAGTGGGGTTATTGACAATGCTTTGTATCCAGTGTTGTTCTTGGATTACCTTAAGTCAGCCATTCCAGCTTTAGGAGGTGGTTTTCCAAGGATAATAGCAGTGCTAGTTTTAGTTTTGGTACTCACTTACATGAACTACAGGGGCTTGACCATAGTGGGTTGGGCTGCAATATTGTTGGGAATCTTTACATTGCTACCTTTCATGGTTATGGGAATTATAGCAATTCCTAGAATAAAACCAACCAGGTGGCTCATGGTGGACTTGAAGAATGTGAAGTGGGGTTTATACTTGAACACACTCTTCTGGAATTTGAACTATTGGGACTCAATTAGTACCCTTGCTGGAGAGGTGGATAATTGTTGA 699 0.422 MECSDAEYVALGGEGSSPKLEKTRKVSIIPLIFLIFYEVSGGPFGVEDTVRAAGPFLALIGFLVFPFIWSVPEALITAEMATMFPENGGYVVWVSSALGPYWGFQLGWMKWLSGVIDNALYPVLFLDYLKSAIPALGGGFPRIIAVLVLVLVLTYMNYRGLTIVGWAAILLGIFTLLPFMVMGIIAIPRIKPTRWLMVDLKNVKWGLYLNTLFWNLNYWDSISTLAGEVDNC 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02749 232 PANTHER POLYAMINE TRANSPORTER PUT1 2 231 IPR044566 GO:0022857
Cca02g02749 232 Gene3D Amino acid/polyamine transporter I 21 232 - -
Cca02g02749 232 Pfam Amino acid permease 32 192 IPR002293 GO:0016020|GO:0022857|GO:0055085
Cca02g02749 232 PANTHER POLYAMINE TRANSPORTER PUT1 2 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02749 Cca-Chr2 48982550 48983248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02749 2 231 Organic Solute Cotransporters AT1G31830 72.650 8.81e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02749 - - ccaj:109796089 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02749 02 48982550 48983248 Cca02g02749 02 48982550 48983248 ECH