Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02741 ATGGTGTCTACTTCGTTGGTAACAGGGAAACAAACAGCAGCTGCGTCTTTCACAGCAACAGGAAAGCAGGGCTTTGAAATTCGTTGTGTTAAAAGAAAGTCATTGTTGGAAGTCCTTGCCAATGAGCTTCCAAGTGGAACCATCAGATACTTGTCAAAGGTTGTTGCTATTGAGGAATCTGACTTCTATAAGATACTTCATCTTGCTGATGGGACAACCATCAAAACTAAGGTATTGATTGGGTGTGATGGAGTGAACTCCATAGTGGCAAAGTGGCTAGGCTTCAAGAATGCCTCTTTTACAAAGAGATCTGCAATCAGGGGTTGTGCCGAGATCAAGACCAATCACACGCTTGAGCCCAAGTTCATGCAGTTCTTTGGCAAAGGTTTTAGAGCTGGAGTTATTCCTTGTGATGAGAAAACTGTTTACTGGTttttcacttggacacccaacaaccaagACAAAGAGCTAGAAGAGAACCCTGCCAAACTGAAACAATATGTGCTAAACAAGCTTGAGAAAATGCCAAGTAATGTTAGATCCTATATAGAAAAAACAGCACTAGATGCTTTCCTATTAGCTCCATTGAGATATAGACATCCCTTGGAACTCATGTTGGGGAACATAAGTAAAGGCAACGTTTCTGTTGCTGGAGATGCTTTCCACCCCATGACTCCTGACCTAGGCCAAGGAGGATGTTGTGCCCTAGAAGATGGGGTTGTTTTAGCCAGGTGCTTAGCTGAGGCCTTCTCCAAAGAACCAAATACACATATCAAGGGGAAGGATGAAGAAGAGGGCCAATACAAAAGGATTGAGGAAAGCTTGAAGAAATATGTAAAGGGGAGAAGATGGAGAAGCATTGATGTCATTGCTACAGCTTATATGGTTGGTTCTATTCAGCAGGCTGAGTCCAAATTGATTACCTTTTTGAGGGACAACATTTTGGCTTCATTCTTAGTTAGCCTATTGTTCAGTAAGTCAGGCTATGATTGTGGAAAACTAAATAGCTCTTAG 1014 0.4093 MVSTSLVTGKQTAAASFTATGKQGFEIRCVKRKSLLEVLANELPSGTIRYLSKVVAIEESDFYKILHLADGTTIKTKVLIGCDGVNSIVAKWLGFKNASFTKRSAIRGCAEIKTNHTLEPKFMQFFGKGFRAGVIPCDEKTVYWFFTWTPNNQDKELEENPAKLKQYVLNKLEKMPSNVRSYIEKTALDAFLLAPLRYRHPLELMLGNISKGNVSVAGDAFHPMTPDLGQGGCCALEDGVVLARCLAEAFSKEPNTHIKGKDEEEGQYKRIEESLKKYVKGRRWRSIDVIATAYMVGSIQQAESKLITFLRDNILASFLVSLLFSKSGYDCGKLNSS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02741 337 Gene3D - 2 317 IPR036188 -
Cca02g02741 337 SUPERFAMILY FAD/NAD(P)-binding domain 8 318 IPR036188 -
Cca02g02741 337 Pfam FAD binding domain 72 251 IPR002938 GO:0071949
Cca02g02741 337 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 336 IPR044560 -
Cca02g02741 337 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 75 90 - -
Cca02g02741 337 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 226 242 - -
Cca02g02741 337 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
Cca02g02741 337 PANTHER MONOOXYGENASE 2-RELATED 2 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02741 Cca-Chr2 48863959 48866555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02741 25 335 Miscellaneous Gene Families AT5G05320 54.808 1.26e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02741 - - gmx:100789314 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02741 02 48863959 48866555 Cca02g02741 02 48863959 48866555 ECH