Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02740 ATGGAATCATTAGTTGAAGACGTTGTCATTGTGGGAGCTGGGATTGCTGGACTCACAACATCCTTGGCACTTCACAGGTTGGGTGTCCGAAGTTTGGTATTAGAATGTTCGGATGCTTTAAGGGTCACTGGGTTTGCTTTGACAACATGGACAAACGCTTGGAAAGCCTTGGATGCTGTTGGCGTCGGAGCCATTCTTCGTCAGCAACATCTCCAGCTAAATGAGAATGTGACTACGTCTTTGGTTATGGAGCAGCAAACATCAAGTTTGTCTCTCAAGGGCACAGGAAAACATGGAGAGAGGGAAGTTCGTTGTGTTAGAAGACAACTAATGTTGGAAGCACTTGCTAAGGAGCTTCCAAGTGGCACGATGAGGTTCATGTCAAAGGTTGTTGCTATACACGAATCTGGCTTTTCTAAGATACTCCATCTTGCTGATGGAACAACCATAAAAACCAAGGTGTTGATTGGGTGTGATGGAATAAACTCTATGGTCGCAAAGTGGCTGGGCTTCAAGGAGGCATCTTTTACGGGGAGATACGTAATCAGGGGTTATACAAAGTTGATGGGCCATGATGGGCTTGAGCCCAAATTCAATCACTACTTTGGGAAAGGCTTTCGAGCTGGTGTATTGCCCTGTGATGACAACACTGTTTATTGGTTTTTAACTTGGACTCCCACCACTCAAGAAATGGGGCTAACAGAAAACCCAGCTAAAATGAAGCAATTAGCGTTGAGCATGCTTGAGAAGATGCCAAGTGAAGTCAAATCCTTTATAGAGAAAACAGAAGTGAAAGATATTTTAACTTCACCATTGAGATATAGACATCAGTGGGAACTAATGTTGGGGAACATTAGTAAAGACAACGTTTGTGTTGTTGGAGATGCATTTCACCCCATGGCCCCTGACCTAGGCCAAGGTGGTTGTTGTGCTTTGGAGGATGGGATTGTCTTAGCCAGGTTTCTAGCTGAGGCCTTCAACAAAAAACCTTGCAAACACATTAAAGAGATGGATGAAGAGGCTAAGGCTGAGGTGCAACACAAGAAGATTGTGGCTAGCTTGAAGAAATATGCAAAAGAGAGAAAATGGAGAAGCTTTGATATTAGTGTTACATCTTATGTCATGGGGCTTGTTCTGCAGGGTGATTTGAAATTGGTAGCACATTTCAGGGACAAAGTTTTGCCTAATTTCCTAGCTGAGTTGCTATTGAAGAAGTCAGATTTTGATTGTGGAAAACTTATATGTGACACCTATGATGTGAGTCTTTCGCATAttcttcttcttcttcctcctcctcttcttcttcttcttcttcttctttttcatctgatacacaaaCCTGTTGTTCTTTCTCGCAAGATGGGAGTTCAACGGCATGAAGAACCTTCTGAAGACAGCGAGCCTGCTGAAAGTGCTTGTGCTAGCAGTTCTTTGAACCAAGGTGCTCTTGCCAGTGAGTCTGCGAACAGCAATCTGATTGTAAATACCGAAAGTAGTGATGTTAATGAGCCGGATGATGTTTCTTGTAAGAAAAGTAATACACCACATATCTATAGACAAGATGTTGTGAAAAATAATATCAGTGGCATGATTGGGATTGTTACAGAAGTTGCGGGTGATTCAGATTCGGATTCAGATAGTAGCATCACtgacaatgagaatgatagtgaggatgaggatggtgacggtgaggaAGGCAATGACAGTAATAACGCTAGCAGAAATTCTGAAAGTAATGGTGCTGCTGGGCATTGTAAAACTGATGCTCTTCTGGCTGACCAGCTGCGTGTACTGTGGATGGATGAATCTGAATCTACTCAAAATTTTAGTGATGTTGAAGTTGTTGATCGTGGGTTTTTACATGGGGATTTTGTTGCCGCTGCTTCAGATCCTACTGGGCAAGTTGGTGTAGTGGTTGATGTCAATATGTGTGTGGATCTGTTGGCCTATGATGGGTCTATAATAAAAGATGTCTCATCAAAAAACTTGAAGCGTATTAGGGATTTCACTGTTGGTGATTATGTGGTGCTTGGGCCCTGGCTTGGCAGAATTGATGACGTTTTGGATAATGTAACCGTCTTATTTGATGATGGTTCAGTTTGTAAAGTCTCGAAAGCAGATCCATTGAATCTTAAACCAATTTCTAAGAATATTCTTGAAGATGGGCATTTTCCTTATTACCCAGGGCAACGTGTAAGGGCCAGCTCCTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCTAATAGGTTAGAAGGTACAGTCACTAAGGTTACTGTTGGATCAGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGCCATATTCTTCTACTGCCCCAGCTGAGGAGCAGAGCCCAAAAAACTTAAAATTGTTGTCTTGTTTTGCTCATGCAAATTGGCAATTGGGTGATTGGTGTCTCTTACCCTCATCAGTACTGTCATCCTCAGTTTCCATGGACAAAGGCGTATCAAAATTGGAACTTAAGGATTCTACTAACACTGAATTGGATTCTAATCAGACAGGAAGTGGATGTGATTCAGAAGAAACTGCAGTTGAGGAAACAAATGGAAATAAGGATACTATGGACCTTGATCCAGTTGATGCTTTGGAAGGGAATGATGGAAATGATAAGAATAATCCTTCACGTGATTCTAGCTCATGTGGTAGTTCTATCTCTGTATCAAAGGAACCTGTTCATGAAGCTTGGCCTCTTCACCGCAAGAAAATTaggaaagttgtaatcaggaaagagaaaagggctcgaaagaaagaggaaagTTTTGAGAAAGCTCTTTTGATTACCAACACAAGGACAAGAGTTGATGTTGCATGGCAGGATGGAAAAATAGAGCGTGAACTAAATTCTACAAGTTTAATTCCTATAGATAATCCTGGTGATCATGAATTCGTTTCAGAACAATATGTGGTAGAGAAGACTTCTGATGATGGCGAGGATATGTCTGAAGCTAGGCGAGTTGGGGTAGTGAGAAGTGTTAATGCCAAGGAGCGCACAGCTAGTGTGAGGTGGTTAAAAAAGGTTGACAGAGCAGAAGATCCTCGAGAGTTTGACAACGAAGAAGTTGTAAGTGTGTATGAGCTAGAGGGCCATCCAGATTATGATTACTGCTATGGGGATGTGGTTGTCCGCCTGTCACCTGTGTCTGTCTGTTTAGAAACAGCTTCTGTTGGAGAGTCCACTGAGAAATCAAAGCAGAAAAGTGAAGAGAGTGGGATTAAAAAGGAACTAAAAATCCAAACTGGTGCTAGTAAAATAGAAAATGTATCCGATGATATTTCTGTGCAATTTTCTGACCTCTCTTGGGTTGGAAATATAACTGGCCTTAAGAATGGTGATATTGAAGTTACATGGGCTGATGGAATGGTGTCAACGGTTGGACCCCAAGCAATCTATGTGGTTGGTCGAGACGATGATGATGAATCAATTGCTGCTGGGAGTGAAATAAGTGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGAAGTCCTTGAGGATTCCAGAGAGGATATTGAGAGGGAAAATTCAAGCAGTGTTACTTCTGAGGTAGAAGAAGTTGGAGAGAATGATTTTGGTAGGGCTGCAGCACTTTCAGTTCCCCTGGCAGCATTTCGATTTGTCACTAGACTTGCCAGTGAAATATTCTCAAGGGGCCAAAGGAATGTAGATCCTATTAACTCAGAGTCAAAAGGTGAAACTGAGCATCCATCTCCAGCAGTTAATGACGAGTCTAGTTCACAGAAACACATTGCTATTGATGATGATAATTCAGACAATACAAACGAAAGATATGAGGAGGTTGTTTCAGAAGCAACTGAAACTCTGGAAGCATGTGTGGCACTCTGTAGCTTGAGAAATGAAGATGCTCCAGCAAGTTGCGATAATGACACTTGCAGTTTGAAACATTTTGACATAACTAAAGATCCAACAGACCACTATTTTATTGGTGCAAATGGACAGAGTAACAACCGGAAATGGTTTAAGAAAGTGCAACAAGATTGGAACATACTGCAGAATAACCTTCCTGAGGAAATCTTTGTACGAGTTTATGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTAGGGCCATATGGAACCCCTTACCAAGATGGGCTCTTTTTCTTTGATTTTCACCTTCCGCCAGAATACCCCGATGTTCCACCGtcagcatactatcattctggtggttggcgaattaaccctaatctgtatgaggaagggaaggtttgccttagccttctaaatacatggacaggcagaggaaatgaagtatgggatccaaaatcttctagcatccttcaagtcctagtttcactgcaaggtttagtgctcaattctaagccttacttcaacgaagctgggtatgataagcaggttggaacagcagaaggagagaagaactcattgtcgtacaatgagaatacctttttacttaactgcaagaccatgatgtatcttatgaggagaccccccaagGATTTTGATGTGCTCATCAAAGAACATTTTAGGAGGCGGGGTCATAACATCCTTAAGGCTTGTGATGCATATATGAAAGGTTACTTGATTGGCTCACTGACTAGAGATGCCTCTGTAAGTGAGAAGAGCAGTGAGAATTCAACCTCTGTGGGTTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTTTTATCACTAAGTGAGGTTGGAGCTGATTGCGAGGAATTTAAGCATCTGAAAGATTTGTAG 4770 0.3767 MESLVEDVVIVGAGIAGLTTSLALHRLGVRSLVLECSDALRVTGFALTTWTNAWKALDAVGVGAILRQQHLQLNENVTTSLVMEQQTSSLSLKGTGKHGEREVRCVRRQLMLEALAKELPSGTMRFMSKVVAIHESGFSKILHLADGTTIKTKVLIGCDGINSMVAKWLGFKEASFTGRYVIRGYTKLMGHDGLEPKFNHYFGKGFRAGVLPCDDNTVYWFLTWTPTTQEMGLTENPAKMKQLALSMLEKMPSEVKSFIEKTEVKDILTSPLRYRHQWELMLGNISKDNVCVVGDAFHPMAPDLGQGGCCALEDGIVLARFLAEAFNKKPCKHIKEMDEEAKAEVQHKKIVASLKKYAKERKWRSFDISVTSYVMGLVLQGDLKLVAHFRDKVLPNFLAELLLKKSDFDCGKLICDTYDVSLSHILLLLPPPLLLLLLLLFHLIHKPVVLSRKMGVQRHEEPSEDSEPAESACASSSLNQGALASESANSNLIVNTESSDVNEPDDVSCKKSNTPHIYRQDVVKNNISGMIGIVTEVAGDSDSDSDSSITDNENDSEDEDGDGEEGNDSNNASRNSESNGAAGHCKTDALLADQLRVLWMDESESTQNFSDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNMCVDLLAYDGSIIKDVSSKNLKRIRDFTVGDYVVLGPWLGRIDDVLDNVTVLFDDGSVCKVSKADPLNLKPISKNILEDGHFPYYPGQRVRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPYSSTAPAEEQSPKNLKLLSCFAHANWQLGDWCLLPSSVLSSSVSMDKGVSKLELKDSTNTELDSNQTGSGCDSEETAVEETNGNKDTMDLDPVDALEGNDGNDKNNPSRDSSSCGSSISVSKEPVHEAWPLHRKKIRKVVIRKEKRARKKEESFEKALLITNTRTRVDVAWQDGKIERELNSTSLIPIDNPGDHEFVSEQYVVEKTSDDGEDMSEARRVGVVRSVNAKERTASVRWLKKVDRAEDPREFDNEEVVSVYELEGHPDYDYCYGDVVVRLSPVSVCLETASVGESTEKSKQKSEESGIKKELKIQTGASKIENVSDDISVQFSDLSWVGNITGLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSEISDAASWETVNDDEMEVLEDSREDIERENSSSVTSEVEEVGENDFGRAAALSVPLAAFRFVTRLASEIFSRGQRNVDPINSESKGETEHPSPAVNDESSSQKHIAIDDDNSDNTNERYEEVVSEATETLEACVALCSLRNEDAPASCDNDTCSLKHFDITKDPTDHYFIGANGQSNNRKWFKKVQQDWNILQNNLPEEIFVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLSYNENTFLLNCKTMMYLMRRPPKDFDVLIKEHFRRRGHNILKACDAYMKGYLIGSLTRDASVSEKSSENSTSVGFKLMLAKIVPKLFLSLSEVGADCEEFKHLKDL 1589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02740 1589 MobiDBLite consensus disorder prediction 857 871 - -
Cca02g02740 1589 Gene3D - 7 376 IPR036188 -
Cca02g02740 1589 SUPERFAMILY FAD/NAD(P)-binding domain 7 399 IPR036188 -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 536 583 - -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 1179 1198 - -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 835 905 - -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 1234 1275 - -
Cca02g02740 1589 Pfam FAD binding domain 7 340 IPR002938 GO:0071949
Cca02g02740 1589 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 23-RELATED 500 1587 - -
Cca02g02740 1589 SMART ubc_7 1341 1498 - -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 546 566 - -
Cca02g02740 1589 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1338 1498 IPR000608 -
Cca02g02740 1589 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 500 1587 - -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 568 582 - -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 1260 1275 - -
Cca02g02740 1589 Gene3D Ubiquitin Conjugating Enzyme 1307 1570 IPR016135 -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 880 899 - -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 838 856 - -
Cca02g02740 1589 SUPERFAMILY UBC-like 1320 1505 IPR016135 -
Cca02g02740 1589 Pfam Ubiquitin-conjugating enzyme 1343 1487 IPR000608 -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 1234 1259 - -
Cca02g02740 1589 CDD UBCc 1341 1491 IPR000608 -
Cca02g02740 1589 MobiDBLite consensus disorder prediction 459 480 - -
Cca02g02740 1589 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 - -
Cca02g02740 1589 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 - -
Cca02g02740 1589 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 - -
Cca02g02740 1589 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02740 Cca-Chr2 48838292 48857698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02740 616 816 Miscellaneous Gene Families AT2G33770 42.574 6.71e-50 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02740 K10581 - gmx:100809513 1920.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02740 02 48838292 48857698 Cca02g02740 02 48838292 48857698 ECH