Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02739 ATGATATCTCATATTTCCAAGGACATGGGGGTTACTAGTTTTCTCAAAAATGGTACCTTCTTGCTGGCAATTCTTACTTTGCTAAGTAGTTTTCCCTTGAACCACGTGATGGCTAGTGTTTACACCGTTGGTGACCAAGACGAATGGAGTAGCCAAACAAATTATGCGAGATGGGCAGAGAGACACAGTTTTAACCGTGGCGATGTTCTTGTTTTCAAGTACGTGAAAGGGCAACATAATGTGTATGAAGTGAGTGAGGAGACATTCCGATCGTGTGATGCAAGTAGTGGAGTATTGGCTAAATACGAGAGTGGAGAAGATGAAGTGGCACTGAATGAGGTTAAGAAATATTGGTTCATCTGCAACGTAGTAGGGCACTGCCTTGGGGGCATGAGATTTGGAATTCAAGTAAAAGGTGACAGCAATGTTACGGATGGTGTATTTCACTCACCAATTGCACCAACTCCCTCAAGTAATTCTTGTTCCAGTTATATCTCTCAAAGATGGAGGGTGATTCACAATTTTCTTCTTTTCGGATTGTTATTGTTCAACTACTCTTTTTGA 564 0.4131 MISHISKDMGVTSFLKNGTFLLAILTLLSSFPLNHVMASVYTVGDQDEWSSQTNYARWAERHSFNRGDVLVFKYVKGQHNVYEVSEETFRSCDASSGVLAKYESGEDEVALNEVKKYWFICNVVGHCLGGMRFGIQVKGDSNVTDGVFHSPIAPTPSSNSCSSYISQRWRVIHNFLLFGLLLFNYSF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02739 187 Pfam Plastocyanin-like domain 49 131 IPR003245 GO:0009055
Cca02g02739 187 CDD Phytocyanin 40 137 - -
Cca02g02739 187 SUPERFAMILY Cupredoxins 38 137 IPR008972 -
Cca02g02739 187 Gene3D - 37 143 IPR008972 -
Cca02g02739 187 ProSiteProfiles Phytocyanin domain profile. 39 139 IPR003245 GO:0009055
Cca02g02739 187 PANTHER BLUE COPPER BINDING PROTEIN-LIKE 20 151 - -
Cca02g02739 187 PANTHER BLUE COPPER PROTEIN 20 151 IPR039391 GO:0009055
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02739 13 137 Miscellaneous Gene Families AT2G31050 38.095 2.49e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02739 - - gmx:100788784 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02739 02 48834310 48835014 Cca02g02739 02 48834310 48835014 ECH