Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02736 ATGTCATTGAACTTTGACAGGAAAAAGAAGCTTGGTTCTAAGCCAGAACCCCCCGTTCTTGACAGTGTTCCACCCTCAAAAATTGGAGCTATTTATCTCTCCGATGCTTCATCACCGTTATCAAATTATTCTGAAAAGACAAAGGAGGAGCCAAAAAGCAATGAGCTAATACCAGTTTCTGGAGAAATACAAGTCCTAGATGTCATGGCTATGAATGACAAGGTCCAGTCAAAGGATGGTGCTGAGCAACCGGCCAATGCGATAAGAACAAAGCACAATGGGGACAAAAATGCTTCACATAAAGTTGTTCCAATCAGCTCTGTTGACGACACGAGAGGTCTTACTAAACCAGATGGCGGGTCCATGAATTATTGCTTTTCTGGTGGCCTCAATGACAATGATGAGAGTGATGGAGAGGAGACCGAGTCTGTGGTCTCGGAGGCTCGTGTCCCGGTTGGAAAATACCATGTGAAAGAAAGCTTTGCTCCCATTCTGCGGTCCATCTTTGAAAAGTATGGAGATATAGGAGCAAGCTGCCACTTGGAATCAGTGGTCATGAGGTCATACTATATTGAGTGTGTGTGCTTTGTGATACAAGAGTTGCAGTGTACTCCAATAATGGAACTAACAAAGTCCAAAGTCAAAGAACTTTTGGCTATTCTCAAGGATGTAGAATCTGCTCAACTTCGTGTGGCGTGGTTGCGCAGCATAGTTGATGAAGTTGCTGAGAACATAGAACTAGTCCATGAGCACCGTGTGGTGGAGATGGCAAAGGTTAACTCTGATCGCGAAATGGAAGCATTGAACAAAGATCTGGAATCAGAAATGGAAATCTTGGCTCAGAAAGAACAAGAGGTAAAAGATGTTAAAACAAGAATTGAACAGATCAGAGTGCGTTTGAAGGAGCTTGAGGTGAAGTCTTCTGATTTGGACAAGAACATGCTGGCACTCAAGTCCCGGGCAGTGCTTAAATTAGATACCAAATCCTTGCTAGATGAACTACAAATAGCAAAGTTATCCACATTTCCACTTCTCCCAGTGGCAGAGCAGAGACGATCAAGTGGAATCGCTTCTGCGTTGTTAAAGGTGACAAGTTCTCTGCCCGAGATGTCTGAGGAGCGAGCAGTGCATCCCGATTGCCGGAATGCTAGTAACCCTTATCACGAATGTAGCGATTACTGTTTTAGGGTAATAGCTGAAACCAAAATTAGGTCTCAGCAACAGGAATCAGAAGTTGGACAAGCTAGTGGTGGAAGCAACTGTAAGCAAGCCATCCCAGATGAATCATATGTAGCTGAGGAAATGTATGATGACAGACCCAATCTGGAAGGAAACTCTGATAGTGATTCTGACCAGCCTGCTGTGCAGGAAGCGGAGCAAATGGAGGGTGACTACTCAAAACTCTCTTCAAGGCAGAAGAAGTGGATGGAGTTGAGAGCCAAGATGCAAGAAGCAAAAAAGCGTAATCAAATTGAAATAGCTGCTGAAAAAAAGAGGATGGAACCTCCAACTGAGTCTAGGGGTGTTTCTAAACAGAAATGGCTTGAGGATAGGAAGAGAAAGATTGGAAAACTTCTTGATGCAAATGGATTGGATATGACGAAGGCATATATGCTTGACACACAGGAGGCAGCAGAGGAAAAATACAAGAAATGGGAAAAGGATCCTGCTCCATTCGGGTGGGATGTGTTTAATCAGAAGACATTATACAATGCATACAAAAAGCGGACCAAGAACGTTGAAGTAGATGTAGAAGAATATAATAAAATGAAAGAAACTGATCCGGAGTTCTACAGAGAAGCTTCAAGTCTCCAGTATGGAAAGGCACCAAAAATCTCAGAGGAGAAGATTGACAGGATGGTGCAGGAGCTAAAGGATAGGGAAGAGAAGCGCAGGTCATTTAGCAGGAGAAGAAGATTTCACGAAGAGAAAGATATTGACTCGATCAATGACCGTAATGAGCATTTCAACAAAAAGATTGAACGAGCCTTTGGTAAGTACACGCTGGAGATTAAAAATAATCTTGAGCGAGGAACTGCATTGCCTGACTAA 2052 0.4318 MSLNFDRKKKLGSKPEPPVLDSVPPSKIGAIYLSDASSPLSNYSEKTKEEPKSNELIPVSGEIQVLDVMAMNDKVQSKDGAEQPANAIRTKHNGDKNASHKVVPISSVDDTRGLTKPDGGSMNYCFSGGLNDNDESDGEETESVVSEARVPVGKYHVKESFAPILRSIFEKYGDIGASCHLESVVMRSYYIECVCFVIQELQCTPIMELTKSKVKELLAILKDVESAQLRVAWLRSIVDEVAENIELVHEHRVVEMAKVNSDREMEALNKDLESEMEILAQKEQEVKDVKTRIEQIRVRLKELEVKSSDLDKNMLALKSRAVLKLDTKSLLDELQIAKLSTFPLLPVAEQRRSSGIASALLKVTSSLPEMSEERAVHPDCRNASNPYHECSDYCFRVIAETKIRSQQQESEVGQASGGSNCKQAIPDESYVAEEMYDDRPNLEGNSDSDSDQPAVQEAEQMEGDYSKLSSRQKKWMELRAKMQEAKKRNQIEIAAEKKRMEPPTESRGVSKQKWLEDRKRKIGKLLDANGLDMTKAYMLDTQEAAEEKYKKWEKDPAPFGWDVFNQKTLYNAYKKRTKNVEVDVEEYNKMKETDPEFYREASSLQYGKAPKISEEKIDRMVQELKDREEKRRSFSRRRRFHEEKDIDSINDRNEHFNKKIERAFGKYTLEIKNNLERGTALPD 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02736 683 MobiDBLite consensus disorder prediction 438 470 - -
Cca02g02736 683 Pfam Arabidopsis phospholipase-like protein (PEARLI 4) 130 332 IPR007942 -
Cca02g02736 683 PANTHER PRE-MRNA-SPLICING FACTOR SYF2 370 683 - -
Cca02g02736 683 Pfam SYF2 splicing factor 529 676 IPR013260 -
Cca02g02736 683 PANTHER GCIP-INTERACTING PROTEIN P29 370 683 IPR013260 -
Cca02g02736 683 MobiDBLite consensus disorder prediction 1 15 - -
Cca02g02736 683 MobiDBLite consensus disorder prediction 1 26 - -
Cca02g02736 683 MobiDBLite consensus disorder prediction 89 145 - -
Cca02g02736 683 Coils Coil 262 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02736 Cca-Chr2 48783330 48791541 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02736 K12868 - ccaj:109797620 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02736 02 48783330 48791541 Cca02g02736 02 48783330 48791541 ECH