Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02654 ATGAGGCCTGGTGCAAAGTTATATGAGTTTCATGAACCGAAGAAGGTGATCAATGGTCCACGTCCTTCTCCTTTGATGATCAACAAAGATTCTCACAGGATTCGCAAGCCTTCAACATGTGTTGATGCAGACACCAAACTGAACAAACCACAGAGGATTAATCCCATCATCATATACACACATTCACCCAAGATTATCCACACCAAGGCTAAAGATTTCATGGCTCTTGTTCAAAGACTCACGGGTAGGTCAAGCACCAACGATGACGTGTCCACTACCTCACTGCCACAAGAAGCTTCAGAGAATTTTGGATCATCTCTGTCTGATGGATCCAACAACAATAGTAATAATGAAACTAGCTCAGCTCTTAGGAGGGGTGAATATGATAGCACAAATGTTCAACGTAGTCCCTCTCATCTCGATTTTGTTGATATGCCACTTTTCACTCCAAATTCCTCAGATTTCTTTTGTTCATCTCGTTCGATGTTTAAATATTCTGATTCCCCATATGGGGTTCTGGGAAGTTTGATATCCCCTTCCGCGTTGGAATTCATCAAAGAACTGCCCGAATATTGA 576 0.4201 MRPGAKLYEFHEPKKVINGPRPSPLMINKDSHRIRKPSTCVDADTKLNKPQRINPIIIYTHSPKIIHTKAKDFMALVQRLTGRSSTNDDVSTTSLPQEASENFGSSLSDGSNNNSNNETSSALRRGEYDSTNVQRSPSHLDFVDMPLFTPNSSDFFCSSRSMFKYSDSPYGVLGSLISPSALEFIKELPEY 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02654 191 MobiDBLite consensus disorder prediction 82 135 - -
Cca02g02654 191 PANTHER VQ MOTIF-CONTAINING PROTEIN 8, CHLOROPLASTIC 14 191 IPR039833 -
Cca02g02654 191 Pfam VQ motif 60 86 IPR008889 -
Cca02g02654 191 PANTHER F16F4.1 PROTEIN-RELATED 14 191 IPR039607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02654 Cca-Chr2 47772016 47772929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02654 - - gmx:102663683 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02654 02 47772016 47772929 Cca02g02654 02 47772016 47772929 ECH