Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca02g02646 | ATGGTGTTTACGCCTTCCGAGGGACAAGAGACCATGGCCATGGGACCCGAGAGATCCAAGCCGCTTCACAATTTCATGTTGCCCTCCTATCTCAAGTGGGGGAATCAGCGCCACCTCCGCTGCACCAAGCTCCCCACCGCCGGAGATCGCCGATCTCCGCCCCCTAATGCCACGCCTCCATTCCTCGCCGACGCCGGGATCGACGCCGTCAGGGAGAAGCTCATGCTCGATCTCAAAACCGAGGCCGATAGGATGAAGCACGCGATTCTCGGCGCCGGCGACAATCATCTCCACATCCACCACGCGCCGGAGGAGGACTcgccgccgccgccgcacgccgGACCCAGGACGTGGAATCTCCGCACCCGCCGCGCTCCGGTCGGGGACAGGGGGGTCCGGATTGACGAGAGGAGGTCTCCGTTGAGGACTTccgccgccgccgccgccgGGAAGTCGCCGAAATTGAGAGGGTCGCCGGAGAAGGAGGAGCATCCGGTGAAGTTTTCTCCGACGCTTTCGAAGAAAGAGTTAGAGGAGGATTTCATGAAGATGGTGGGCCACCGGCCTCCCCGCAGGCCCAAGAGGCGGCCCAGAAACGTGCAGAAGCAGTTGGATaccctttatcctggtcagtggttgtcggaggtcagtgccgactgttacaaggttcctgacgacgcccaaactggcaagAGGTAG | 699 | 0.5093 | MVFTPSEGQETMAMGPERSKPLHNFMLPSYLKWGNQRHLRCTKLPTAGDRRSPPPNATPPFLADAGIDAVREKLMLDLKTEADRMKHAILGAGDNHLHIHHAPEEDSPPPPHAGPRTWNLRTRRAPVGDRGVRIDERRSPLRTSAAAAAGKSPKLRGSPEKEEHPVKFSPTLSKKELEEDFMKMVGHRPPRRPKRRPRNVQKQLDTLYPGQWLSEVSADCYKVPDDAQTGKR | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca02g02646 | 232 | MobiDBLite | consensus disorder prediction | 98 | 205 | - | - | |
| Cca02g02646 | 232 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Cca02g02646 | 232 | PANTHER | OS01G0688600 PROTEIN | 12 | 225 | - | - | |
| Cca02g02646 | 232 | PANTHER | PUTATIVE (DUF1639)-RELATED | 12 | 225 | - | - | |
| Cca02g02646 | 232 | MobiDBLite | consensus disorder prediction | 126 | 140 | - | - | |
| Cca02g02646 | 232 | MobiDBLite | consensus disorder prediction | 155 | 187 | - | - | |
| Cca02g02646 | 232 | Pfam | Protein of unknown function (DUF1639) | 172 | 221 | IPR012438 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca02g02646 | Cca-Chr2 | 47681333 | 47682854 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca02g02646 | - | - | ccaj:109793170 | 473.781 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca02g02646 | 02 | 47681333 | 47682854 | Cca02g02646 | 02 | 47681333 | 47682854 | ECH |