Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02615 ATGCCAGAAATTCAATTGGGTATGCATACTATCAGATCACATGGAACTAGAGTGGCAAGGATACATATGCATGACTGGTTGATTCTTTTGCTTCTTGTGATCATTGATGCTGTCTTGAATATAATAGATCCATTTCACCGTTTTGTTGGAGAGGGGATGTTGACAGACCTTAGATACCCGTTGAAAGAAAATACTATTCCCTTTTGGGCTGTTCCAATAATAGCAATATTGTTACCGTTGGCTGTTATTCTCGTTTACTATTTCATTCGAAAGGATGTTTATGACTTCCACCATGCTATACTGGGCCTTCTATTTTCTGTACTCATTACTGCGGTGATAACTGATGCTATCAAGGATGGTGTTGGACGGCCAAGGCCAGATTTCTTCTGGCGTTGTTTCCCTGATGGAAAAGGGGTGTATGATCCAGTAACAAGTAATGTTCGATGTACTGGAGATAAGGGTGTTATTAAGGAAGGGCACAAAAGTTTCCCCAGTGGACATACCTCTTGGTCCTTTGCTGGTCTTGTTTATCTTGCTTGGTATCTATCTGGAAAAGTTAGGGTATTTGACCGTAGGGGCCATGTTGCAAAGCTGTGTCTTGTTTTCTTACCTCTCCTCGTAGCAGCTATGATTGCTGTTTCTCGTGTAGATGATTATTGGCATCATTGGCAAGATGTGTTTGCTGGAGCTCTTATTGGTTTGTTTATCGAAGCTAGATTGATTGAATATTTAATAAACCCTTTTGTGAAGTTTCTTATACGAATTTCTTTTATCAGGGACGACAATTGCATCCTTTTGTTACTTGCAATTCTTTCCACCTCCATATGA 828 0.3998 MPEIQLGMHTIRSHGTRVARIHMHDWLILLLLVIIDAVLNIIDPFHRFVGEGMLTDLRYPLKENTIPFWAVPIIAILLPLAVILVYYFIRKDVYDFHHAILGLLFSVLITAVITDAIKDGVGRPRPDFFWRCFPDGKGVYDPVTSNVRCTGDKGVIKEGHKSFPSGHTSWSFAGLVYLAWYLSGKVRVFDRRGHVAKLCLVFLPLLVAAMIAVSRVDDYWHHWQDVFAGALIGLFIEARLIEYLINPFVKFLIRISFIRDDNCILLLLAILSTSI 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02615 275 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 21 240 IPR036938 -
Cca02g02615 275 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 19 252 - -
Cca02g02615 275 PANTHER LIPID PHOSPHATE PHOSPHATASE 2 1 238 - -
Cca02g02615 275 Pfam PAP2 superfamily 100 236 IPR000326 -
Cca02g02615 275 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 238 IPR043216 GO:0006644
Cca02g02615 275 SMART acid_phosph_2 98 241 IPR000326 -
Cca02g02615 275 CDD PAP2_containing_1_like 55 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02615 Cca-Chr2 47312659 47317647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02615 1 236 Lipid Metabolism Gene Families AT1G15080 79.661 1.29e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02615 K18693 - gmx:100805924 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02615 02 47312659 47317647 Cca02g02615 02 47312659 47317647 ECH