Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02610 ATGACGGACGATACCGAAGAGTTGGAACCGTTGTTTGATTACACCCGGGTTCAACCTCTGAACCCCATCTGCCTCGATGatgattgtgatgatgacgaggatgtgatTTGCGTTGGCACTAAGAGGAAGACTTCTCAGCCTGTTGGAAATGAGAAGACTCGTGGGAAAGCAGTACCTGTGGTGGACATTGAGGACAAGGATGATGACTGGTTACCTCCCCCACCAAAAATCTCATGTAATGCAGAGAGGAACATTGAAGATGATTCAACTTTGAAAAAATTGAGATTAAAGAAGCAAGAAATTGCTTCATTTGCTGAATCAGCGAAAAATTTGTTAAAAGATGTTGAAGAGTCTTCAAAAGTTGAAATTAGTGATTCATTGCAGTCTTCTGTGGATGTTGTAAAGGAGAAAAGTTCTGAGCATTCTGAAAGAGCAAAAATTCTCATTTCTGTTCAAGACAAGGCTGGAACAAAGCAGATTCGGATGTTCATGGATGACAAATTCGAAAGGATTGTCAAAACATATGCAGAGAAAATCAAGTGTGACCTGAAACAGATAGTATTGTCCTTTGATGGTGATAAAATAAGTTCGTCTGAAACCCCTGCTAGCCTTGGGATGGAGGACGAGGATATTATTGAAGTTCACGTGAAATCAAGTTGA 660 0.3879 MTDDTEELEPLFDYTRVQPLNPICLDDDCDDDEDVICVGTKRKTSQPVGNEKTRGKAVPVVDIEDKDDDWLPPPPKISCNAERNIEDDSTLKKLRLKKQEIASFAESAKNLLKDVEESSKVEISDSLQSSVDVVKEKSSEHSERAKILISVQDKAGTKQIRMFMDDKFERIVKTYAEKIKCDLKQIVLSFDGDKISSSETPASLGMEDEDIIEVHVKSS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02610 219 Gene3D - 128 219 - -
Cca02g02610 219 SUPERFAMILY Ubiquitin-like 145 217 IPR029071 -
Cca02g02610 219 CDD Ubl_SUMO_like 146 215 - -
Cca02g02610 219 MobiDBLite consensus disorder prediction 57 72 - -
Cca02g02610 219 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 1 219 - -
Cca02g02610 219 Pfam Ubiquitin-2 like Rad60 SUMO-like 147 215 IPR022617 -
Cca02g02610 219 ProSiteProfiles Ubiquitin domain profile. 145 219 IPR000626 GO:0005515
Cca02g02610 219 MobiDBLite consensus disorder prediction 43 81 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02610 - - gmx:100500271 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02610 02 47263857 47266984 Cca02g02610 02 47263857 47266984 ECH