Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02603 ATGGAACCTGTTCGTGTGATTCATTTTGAGAAATGGGCTCTTCATAACAAGCGCAAAATCATGCGGCCTAACATAATAAATAGATCTGGTGTTGTTCTTGATGATTTTGGCCTGGAACCTATGCTTCACAGATTTATGACTGATTTCATACGTCCTATGTCTCAAGttttttACACCGAATTTGGTGGATCTTCACTTGATTCTCACCATGGTTTTGCGGCTGTATATGGAATCGATAAGGGTGTGAAAGTTGACTGGCATGTAGATGATGCAGAAGTCTCCATAAATATTTGCTTGGGATCAAAAGATTTTTCGGGTGGACAACTGTTCTTCCGGGGTGTTCGATGTGATGAACATTTAAATTCAGAGATTCATCCAGATGAGATCTTCAATTATTGTCATGTTCCAGGACATGCAATTCTTCATCTTGCTAGTAACCGACATGGTGTTGAACATGTAACATCCGGAATTGGGATGAATTTAGTTCTCTGGTGTAGAAGTTCGGCTTTTAGACAGTTGATGAAAACTCAAAGAGATTTTTCTAGCTGGTGTCGAGAATGCAAACGCAAGAAGGAGGAGGCAGAGTGCCAACGCAAGAAAAAGGAGACACAGTGCTCATAG 621 0.4058 MEPVRVIHFEKWALHNKRKIMRPNIINRSGVVLDDFGLEPMLHRFMTDFIRPMSQVFYTEFGGSSLDSHHGFAAVYGIDKGVKVDWHVDDAEVSINICLGSKDFSGGQLFFRGVRCDEHLNSEIHPDEIFNYCHVPGHAILHLASNRHGVEHVTSGIGMNLVLWCRSSAFRQLMKTQRDFSSWCRECKRKKEEAECQRKKKETQCS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02603 206 Gene3D q2cbj1_9rhob like domain 7 167 - -
Cca02g02603 206 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 67 167 IPR005123 -
Cca02g02603 206 PANTHER - 6 199 - -
Cca02g02603 206 SMART p4hc 4 166 IPR006620 GO:0005506|GO:0016705|GO:0031418
Cca02g02603 206 Coils Coil 184 206 - -
Cca02g02603 206 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 6 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02603 Cca-Chr2 47180812 47182759 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02603 - - vra:106771112 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02603 02 47180812 47182759 Cca02g02603 02 47180812 47182759 ECH