Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02583 ATGGGTAACTACGTTTCATGCACCTTGGCGCCACCTTTGATGAAGAACGCCAAGGCCACGAGGGTGATCATCCCCACCGGCGAAGTGAAGCAATTCAGAGAGATCGTTAAGGCTGCGGAGCTCATGCTGGAGCACCCCAATTACTTCTTGGTCAACTCTCGTTCTCTCCACATCGGTCGAAGGTTCTCTCCTCTCGCTGCTGATGAAGACTTGGAGTTTGGAAACGTCTACATCTTCTTTCCCATGAGGAGAGTCAACTCTCTCGTCACCCCCGCTGACATGGCGGTGCTCTTCTGGCAGCTAACTCTGCCGCTAAGCGGTTATCCGGCGGAAATACACGTGTTCTGCCGGACAACTGCTGTAACGACGGAGCATGCCAGGAAGAACAAAGTTCAAGAGGTGAAAGTGGTTTTGAGATTCCGAGGAGGCAACAGTGGCGGTGGTTCAAAAGGTGGCAGTGGCGGTGGCGGTGGTTCAGGGGGATATATGAAGGCCCCTGGTGGTGATGGAGCTTATATTTCTCGTCCAACATTTGAGAGTAACCCACAGGGTTTCTTTAGTGGTCTGCATGCTGCACAAAAGGACAATAACAACAAGAAGTAG 603 0.5191 MGNYVSCTLAPPLMKNAKATRVIIPTGEVKQFREIVKAAELMLEHPNYFLVNSRSLHIGRRFSPLAADEDLEFGNVYIFFPMRRVNSLVTPADMAVLFWQLTLPLSGYPAEIHVFCRTTAVTTEHARKNKVQEVKVVLRFRGGNSGGGSKGGSGGGGGSGGYMKAPGGDGAYISRPTFESNPQGFFSGLHAAQKDNNNKK 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02583 200 MobiDBLite consensus disorder prediction 176 193 - -
Cca02g02583 200 PANTHER DUF4228 DOMAIN PROTEIN 1 100 - -
Cca02g02583 200 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 100 - -
Cca02g02583 200 MobiDBLite consensus disorder prediction 173 200 - -
Cca02g02583 200 Pfam PADRE domain 1 118 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02583 Cca-Chr2 46924566 46927743 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02583 - - gmx:100794402 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02583 02 46924566 46927743 Cca02g02583 02 46924566 46927743 ECH