Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02572 ATGGCCATTCCCTACCCCCATTTCATCGCCACCGCCAAAGCCGCCCTGGACGCCGGCCTCCACGCGCCCTCCTCCTCCGCCATGCTCTCCCAGGACGACCTCAAGAAAATCGCCGCCTACAAGGCCGTCGAGTACGTGGAGTCCGGCATGGTCCTCGGCCTCGGCACCGGCTCCACCGCCCGCCATGCCGTCGACCGCATCGGCGAGCTCCTCCGCCAGGGCAAGCTCAAGGACATCATCGGCATCCCCACCTCCAAGAAGACCCACGAGCAGGCCCTCTCCCTCGGCATCCCCCTCTCCGATCTCGACGCCCACCCCGTCGTCGATCTCGCCATTGACGGCGCCGACGAGGTCGACCCCTTCCTCAACCTCGTCAAGGGTCGCGGTGGCTCCCTCCTTCGGGAAAAGATGGTGGAGGGTGCGTGCAAGAAGTTTGTGGTTATCGTTGATGAGTCCAAGCTCGTTAACTTTTTGGGGGGTAGTGGGTTGGCCATGCCGGTTGAGGTTATTCAGTTTTGTTGGAGTTTCACTGCCGCGAGGCTGCAGAAGCTCTTTCAGGATGCTGGCTGTGTTGCTAAGCTCAGGGTTGGGGAAAAGGATGAACCTTTTGTTACTGACAATGGGAACTATATTGTGGATTTGTATTTCGAGAGGAGTATTGGGGATTTGAAGGCTGCCAGTGATGCCATTTTGCAGCTTGCGGGGGTTGTGGAGCATGGCATGTTTCTCGATATGGCTACTACTGTGATTGTTGCAGGGGAGCTTGGCTTGACGGTGAAGAATAAGTAG 789 0.5817 MAIPYPHFIATAKAALDAGLHAPSSSAMLSQDDLKKIAAYKAVEYVESGMVLGLGTGSTARHAVDRIGELLRQGKLKDIIGIPTSKKTHEQALSLGIPLSDLDAHPVVDLAIDGADEVDPFLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVNFLGGSGLAMPVEVIQFCWSFTAARLQKLFQDAGCVAKLRVGEKDEPFVTDNGNYIVDLYFERSIGDLKAASDAILQLAGVVEHGMFLDMATTVIVAGELGLTVKNK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02572 262 Gene3D - 34 254 - -
Cca02g02572 262 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 262 - -
Cca02g02572 262 CDD RPI_A 34 253 IPR004788 GO:0004751|GO:0009052
Cca02g02572 262 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 163 243 - -
Cca02g02572 262 TIGRFAM rpiA: ribose 5-phosphate isomerase A 34 256 IPR004788 GO:0004751|GO:0009052
Cca02g02572 262 Gene3D - 157 240 - -
Cca02g02572 262 Hamap Ribose-5-phosphate isomerase A [rpiA]. 31 260 IPR020672 GO:0004751|GO:0009052
Cca02g02572 262 PANTHER ISOMERASE, PUTATIVE-RELATED 1 262 - -
Cca02g02572 262 SUPERFAMILY NagB/RpiA/CoA transferase-like 31 180 IPR037171 -
Cca02g02572 262 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 81 254 IPR004788 GO:0004751|GO:0009052
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02572 K01807 - gmx:100795150 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02572 02 46861865 46864782 Cca02g02572 02 46861865 46864782 ECH