Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02571 ATGCAATCCATTTGTTTGATCAATTCCTCACAAATATTCCACCCATTTTCTGTAGCCTCCAAGACATGTGGTTCAAAAGGGAGAAAATTGAGTTCAGTTATTATGGCATCAATGAGGGACCAGAACTTCAGTGGGAGGTTGGTGGATGAGAGCATGATCATACTTAGGAAGAGGATCCATGAGATGAATATGATTGAGAGAAACTATGAGCCACCTTCTGATTGGATGGATTGGGAGAAACGTTATTACACGAGTTACGACTCCATCATATGTGAAGCTGTGGGAGTTTTACAGACACACTTGATGAACACTAGGCCAAGTTTGGCTCTTGGTGCCATGGCTTTGGTTGCAATCAGTGTCCCAACTTCTACTGCTGTGCTTTTTTTTCATTTAGTTGACTTGGCCAAGGCTCTTTCTTCTTTGAATTAA 429 0.4149 MQSICLINSSQIFHPFSVASKTCGSKGRKLSSVIMASMRDQNFSGRLVDESMIILRKRIHEMNMIERNYEPPSDWMDWEKRYYTSYDSIICEAVGVLQTHLMNTRPSLALGAMALVAISVPTSTAVLFFHLVDLAKALSSLN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02571 142 PANTHER OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 18, PUTATIVE-RELATED 1 138 - -
Cca02g02571 142 PANTHER OS01G0121600 PROTEIN 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02571 Cca-Chr2 46845725 46846866 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02571 - - gmx:100789312 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02571 02 46845725 46846866 Cca02g02571 02 46845725 46846866 ECH