Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02554 ATGAAGCGCGGAGCGGTCTCACTGATTGCGTGCGCCTTCGCGGTGGCGCTCTGGGCGGCGAACGGCGAAGACGGGGCCCTGGTCCCGCCTCGGCGGGAAGTGTACGACAATGGGCGAATATTCGACATCAGTCACCGGTACCAGCCGGAGATGCCGGATTGGGAATCGAAGGAGGGCATAGGACAGTTCCTGTGGCTTCCGAAGAGCATGAAGAACGGTTCGCTCGCCAACAACTCCGAAATGAAGCTCCCAACGCACACCGGCACGCACGTCGACGCCCCCGGCCACGTCTTCGACCACTACTTCGACGCCGGCTTCGATGTCGACTCGCTCGACTTACACGTCCTCAACGGACCTGCTCTGTTAGTCGACGTTCCAAGAGATACTAATATAACTGCTCAAGTTATGAAAACGTTTAATATTCCCAGGGGTGTAAAACGTGTGCTCTTCAGAACGTTAAATACCGACAGGAAGCTTATGTTTCAGAAGGAATTTGACACTAGCTATGTGGGATTTACGGTGGATGGAGCAAAATGGCTGGTGGAGAACACAGATATCAAACTTGTTGGAATTGATTATCTATCTGTTGCTTCTTTTGATTACTTGATTCCATCTCACCTTGTTTTTCTAAAGGACAGGGAAATCATTCTCGTGGAAGGCTTGAAGCTTGATGATGTTCCAGCAGGATTATATTCAGTCCACTGCTTACCTCTTAGGTTGGCTGGTGCTGAGGGATCACCAATACGGTGCATTTTGATTAAAAATTAG 768 0.5039 MKRGAVSLIACAFAVALWAANGEDGALVPPRREVYDNGRIFDISHRYQPEMPDWESKEGIGQFLWLPKSMKNGSLANNSEMKLPTHTGTHVDAPGHVFDHYFDAGFDVDSLDLHVLNGPALLVDVPRDTNITAQVMKTFNIPRGVKRVLFRTLNTDRKLMFQKEFDTSYVGFTVDGAKWLVENTDIKLVGIDYLSVASFDYLIPSHLVFLKDREIILVEGLKLDDVPAGLYSVHCLPLRLAGAEGSPIRCILIKN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02554 255 Pfam Putative cyclase 41 196 IPR007325 GO:0004061|GO:0019441
Cca02g02554 255 SUPERFAMILY Putative cyclase 38 253 IPR037175 GO:0004061|GO:0019441
Cca02g02554 255 PANTHER KYNURENINE FORMAMIDASE-LIKE ISOFORM X1 20 254 - -
Cca02g02554 255 Gene3D Putative cyclase 34 253 IPR037175 GO:0004061|GO:0019441
Cca02g02554 255 PANTHER CYCLASE-LIKE PROTEIN 2 20 254 IPR007325 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02554 Cca-Chr2 46654086 46658699 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02554 - - gmx:100782032 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02554 02 46654086 46658699 Cca02g02554 02 46654086 46658699 ECH