Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02551 ATGGGCAAGACAAGGTCAGATTCAAAGTCCGACAGCAAATTCGAAAAGAAGGTTCAATTCTATTCCAAGGTGAAAGACGCTGTTACCTCTTTGAGTGCTCAAAAGTCCATTACTAAGAAAAAGAGCAAACAACAAAGGCGGCAGAACAAAAAATTGAAGGCATATAACCTATCTTCACTTTTAGAGTCCCTTCCTGAGGTGAATGCATCACAAAAACCAGCTAATGAGGATAAATTCAAACTTAATTGTAAATCAAGGCAGAAGTTAGTATTGAAGGAAAGTGATCGATTTTCTGCTGTTCTAAAAGATCCTAACTTTCAAGCAGACCCCTTTTCTGCCATTCATCAATACTTACAGAACAAACAACCAGTAGTAGAGGAACAACCCAAGAAAAAAGTTAAAAAAAATGGATCCAAGAAGAAGAAGAAATCAAAGGCTTTGATTGGATCACAATCTATGGAAATGTAG 468 0.3675 MGKTRSDSKSDSKFEKKVQFYSKVKDAVTSLSAQKSITKKKSKQQRRQNKKLKAYNLSSLLESLPEVNASQKPANEDKFKLNCKSRQKLVLKESDRFSAVLKDPNFQADPFSAIHQYLQNKQPVVEEQPKKKVKKNGSKKKKKSKALIGSQSMEM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02551 155 Pfam Ribosome biogenesis protein SLX9 6 121 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Cca02g02551 155 MobiDBLite consensus disorder prediction 120 155 - -
Cca02g02551 155 PANTHER PROTEIN FAM207A 6 130 - -
Cca02g02551 155 MobiDBLite consensus disorder prediction 33 54 - -
Cca02g02551 155 PANTHER PROTEIN FAM207A 6 130 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02551 - - gmx:100527125 184.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02551 02 46634595 46636536 Cca02g02551 02 46634595 46636536 ECH