Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02546 ATGGGGTCTGGATCTCCCATTCACGTCCTCATGGTGTCCTATCCAGCACAAGGACACATAAACCCTTTGCTTAGACTAGCCAAGTGCCTAGCTGCAAAGGGCTTATTTGTAACCTTCACCACCTCAGAGATCGCTGGAAAACACATGCGATCCGCTAACAACATCACTGAGAAATCAGTGATTCCAATTGGTGATGGTTTTCTCAAGTTCGATTTCTTTGCAGATGCCACGGCAAGTGATGGTACCAAGAAGCTAAGTCTCACTGAGCACTGTGCACAGCTTGAGCTTGTTGTGAAGCAATATGTTTCCCAAGTGATCAAGAAGCATGCTGAGGAAAACCATCCAATTTCATGCATCATAAACAACCCCTTTGTTCCATGGGTTTGTGATGTGGCTGCTCAACATGCTGTTCCTTCTGCCATGCTATGGATTCAATCTAGTGCTGTCTTCACCACTTACTATAGCTATTTCCACAAACTGTTTAAGAACTTGTCCACACCGTTCTGCGTGTTGGTGGATAGTTTTGAGGAACTAGAGCATGACTACATCGAGTATCTTTCAAAGTTTTTGGTTATAAGGCCTGTTGGTCCTTTGTTCAAGATCCCAAAAGATCCATCCACAAGAGATATACGTGGAGATTTTATGAAGAGTGATGATTGCATAGAGTGGCTCAACTCAAGGGCACCAGAATCAGTGGTGTATATCTCCTTTGGGAGTATAGTGTACTTGCCTCAAGAGCAAGTGAGTGAAATAGCATATGGACTATTGAACTCTCATGTCTCATTTTTGTGGGTGTTAAAGCCACCTCCTAAGGAATTTGGGGTTTCCCCTCATGTTCTGCCAAGTGGATTCCTTGAGGAAACAAGAGAGAAAGGCAAAGTGGTGCAGTGGAGCCCACAAGAGGAAGTGTTGGGACATCCTTCAGTGACATGTTTTATGACACATTGTGGATGGAACTCTTCGATGGAAGCACTGAGTTATGGAGTGCCAATGTTGACATTTCCAGCATGGGGAGATCAAGTCACAAATGCAAAGTTCTTGGTGGATGTGTATGGTGTGGGGATTAGAGTGGGTTATGGGCAGGCTGAGAAGAAAGTGATAAGCAGAGATGAGGTGAAGAAGTGCATATTGGAAGCAACAATAGGGCCAAAAGCACAAGAGTTGAAGCAAAACGCTTTCAACTGGAAGAAGGCTGCAGAGGAAGCAGTGGCTGTCGGTGGCTCTTCTACAAGAAACCTTGATGCATTTGTCAAAGATATTAAAGAACGTGGAGCAAAGGAAATATAA 1287 0.4421 MGSGSPIHVLMVSYPAQGHINPLLRLAKCLAAKGLFVTFTTSEIAGKHMRSANNITEKSVIPIGDGFLKFDFFADATASDGTKKLSLTEHCAQLELVVKQYVSQVIKKHAEENHPISCIINNPFVPWVCDVAAQHAVPSAMLWIQSSAVFTTYYSYFHKLFKNLSTPFCVLVDSFEELEHDYIEYLSKFLVIRPVGPLFKIPKDPSTRDIRGDFMKSDDCIEWLNSRAPESVVYISFGSIVYLPQEQVSEIAYGLLNSHVSFLWVLKPPPKEFGVSPHVLPSGFLEETREKGKVVQWSPQEEVLGHPSVTCFMTHCGWNSSMEALSYGVPMLTFPAWGDQVTNAKFLVDVYGVGIRVGYGQAEKKVISRDEVKKCILEATIGPKAQELKQNAFNWKKAAEEAVAVGGSSTRNLDAFVKDIKERGAKEI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02546 428 Gene3D Glycogen Phosphorylase B; 169 410 - -
Cca02g02546 428 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 88 352 IPR002213 GO:0008194
Cca02g02546 428 ProSitePatterns UDP-glycosyltransferases signature. 297 340 IPR035595 -
Cca02g02546 428 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 161 424 - -
Cca02g02546 428 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 161 424 - -
Cca02g02546 428 PANTHER UDP-GLYCOSYLTRANSFERASE 84A1 6 161 - -
Cca02g02546 428 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 161 - -
Cca02g02546 428 Gene3D Glycogen Phosphorylase B; 217 404 - -
Cca02g02546 428 CDD GT1_Gtf-like 8 420 IPR002213 GO:0008194
Cca02g02546 428 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 422 - -
Cca02g02546 428 Gene3D Glycogen Phosphorylase B; 4 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02546 Cca-Chr2 46607046 46608467 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02546 3 420 Glycosyltransferase AT4G15480 46.781 1.95e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02546 - K23279 gmx:100804361 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02546 02 46607046 46608467 Cca02g02546 02 46607046 46608467 ECH