Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02531 ATGATCTTGCATGGCCTTTGTTTCTTAGTATTCCTATCCGCAACACATGCAGTTAAATTCAGTGTCACTAACAACGCACTTACAACTCCCGGTGGTGCGGCTTTCCGTGACAAAATAGGAGCTGCATATGCCCAGCGAACACTTATCGCTGCCACCCGAGTCACACTGAAGGACATCTTTCAGCAAAACAACCTTGCTGACAGAAAAAACGTGCAGAAGATAAGCTTATTTGTTGATGACATGGATGGAGTGGCTTATACTAGCAACGATGAAATTCACGTGAGTGCTAAATATGTTGGAAAGTACAAGGGGGACGTGAAGACAGAGATTACAGGGGTGCTCTATCATGAAGTTGTCCACGTTTGGCAGTGGAATGGGAATGGTGGTGCTCCTGGTGGATTAATAGAAGGTATTGCAGACTATGTGAGGCTGAAGGCAAACTATGCACCTAGTCACTGGGTAAAACCAGGACAAGGACAGAAATGGGACCAGGGTTATGATGTTACTGCTCATTTTCTGGACTATTGTGATAGTCTCAAAAGTGGGTTTGTGGCACAACTGAACAAGCTGATGAGGAGTGGTTATAGTGATCAATTCTTTGTTCAGTTACTGGGAAAGCCTGTTGATCAGTTGTGGCGAGACTACAAGGCTAAGTATGGCAATATTGCCTAA 672 0.4449 MILHGLCFLVFLSATHAVKFSVTNNALTTPGGAAFRDKIGAAYAQRTLIAATRVTLKDIFQQNNLADRKNVQKISLFVDDMDGVAYTSNDEIHVSAKYVGKYKGDVKTEITGVLYHEVVHVWQWNGNGGAPGGLIEGIADYVRLKANYAPSHWVKPGQGQKWDQGYDVTAHFLDYCDSLKSGFVAQLNKLMRSGYSDQFFVQLLGKPVDQLWRDYKAKYGNIA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02531 223 PANTHER BASIC SECRETORY PROTEASE 3 219 - -
Cca02g02531 223 Pfam Peptidase of plants and bacteria 17 215 IPR007541 -
Cca02g02531 223 PANTHER - 3 219 IPR007541 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02531 Cca-Chr2 46485310 46486232 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02531 - - gmx:100499938 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02531 02 46485310 46486232 Cca02g02531 02 46485310 46486232 ECH