Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02528 ATGAGGCACAGCTGTGAGCTTCCCCTGCTCCACCGACTTCTTCTTGTTTACTGTGTTGTCTGCTCTTGCTTGTCTCCTCCTTTGGCAGCTGGAGAACTGGAGGAGTTGTGGAAGCCAACTTCAACCATTGATGGGCCTTCAAGGCCCTTGAAGATTACCTTTGATGGGCCTGCTAAGCACTGGACCGACGCCATCCCCATCGGCAATGGCCGTCTCGGTGCCATGGTTTGGGGCGGTGTTCCATCGGAACTTCTCCAACTCAATGAGGACACGCTTTGGACTGGAACTCCTGGAAACTACGCCAACAAAAATGCTTCACAGGCAGTGGCTCAAGTTAGAAAGCTTGTTGATGATAGAAAATACTCTGAAGCTACGGCGGAAGCTGTCAAGTTGTCCGGAGACCCTTCAGATGTATACCAACTTCTTGGTGATATCAAGTTAGAATTTGATGATTCTCATCTTGCATATTCAAACGAGTCTTATCATAGGGAGCTGGATTTGGATACTGCAACAGTAAAAATCAAGTACTCTGTAGGAGATGTAGAATTTACCAGAGAACATTTTGCTTCTAACCCAGACCAAGTCATAGTGACAAGGTTTTCAGCGAGCAAACCTGGGTCATTATCATTTACAGTGTATTTTGATAGCAAAATGCATCACAGTTCAAGGGTAAGTGGCCAAAATCAGATAATGATTGAAGGAAGCTGTCCTGGCAGGAGGGTCCGGCCAAAAGTGAATTCAGTTGACGATCCGAATCCAAAGGGAATTCAGTTTTCTGCAGTTCTTGATATGCAGATTAGTAAAAATAAAGGGGTTATACATGTTTTGGATGATAAGAAGCTAAGAGTTGAAGGCTCAGATTGGGCTATTTTGCTTTTGACAGCTTCTTCTTCCTTCGATGGCCCATTTACTAAGCCTGAAGACTCCAAGAAGGATCCTACCTCTGAGTCCCTCAGTAAAATGAATTCTGTGAAAAAAAATTCATATGCTGATCTTTATGCACGTCACTTGGATGACTATCAAAATCTTTTTCATCGTGTGTCATTGCAACTCTCTAAAAGCTCCAAAACTGCTCTAGGAAAATCTGTTTTGCACGGAAGGAAATTGGTTTCCTCCCAAACCAACATCTCTCAAATGGGAGGTGATGTCTCCATTCCAACTTCAGCAAGAGTCAAATCTTTTCAAACTGATGAAGATCCTTCCTTTGTGGAGCTTTTGTTTCAATATGGTCGATATCTTCTAATCTCTTGTTCGCGTCCTGGGACCCAGGTGGCAAACCTACAGGGTATCTGGAACAAAGATGTTGAGCCTGCATGGGATGGTGCTCCTCACTTGAACATTAATCTTCAAATGAATTATTTGCCATCCCTTTCTTGCAACCTACACGAGTGTCAAGAGCCCTTATTTGATTTCATGTCCTCTTTGGCAGTCAATGGCAAAAAAACTGCAAAGGTGAACTATGGAGCAAATGGTTGGGTTGCACATCAAGTTTCTGACATATGGGCTAAAACATCGCCAGATCGAGGTGAGGCTGTCTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTGTACCCATTTATGGGAGCAATATATTTATACAATGGACAAAGATTTTCTTAAAAATAAAGCATATCCTTTGTTGGAAGGATGTACATCATTTTTGTTGGATTGGTTGATTGAAGGCCGAGGTGGATTATTGGAAACTAACCCATCAACTTCACCTGAGCACATGTTCATTGCACCAGATCGAAAGCCTGCTAGTGTGAGCTACTCATCAACCATGGATATTTCAATCATAAAAGAAGTTTTCTCTATAATCATTTCTGCAGCTGAGGTTTTAGGAAGACAAAATGACGGTATTATCAAGAGAGTCACTGAGTCTCTGTCTAAGCTTCCTCCGACAAAAGTTGCTGGAGATGGTTCCATTATGGAATGGGCAGAAGATTTTGAGGACCCAGATGTACATCATCGACATGTTTCGCATCTGTTTGGGCTGTTTCCAGGGCACACAATTAGTCTAGAGAAAACTCCAGATCTCTGTAAAGCTGTGGAATTAAGTCTAATTAAAAGAGGAGATGATGGTCCAGGGTGGTCAACAACTTGGAAAGCTTCACTGTGGGCACATCTTCACAATAGCGAGCACGCATATCGTATGATAAAACACTTGATTGTCTTGGTGGATCCTACTCATGAGCGTGATTTTGAAGGAGGACTTTACAGCAACCTGTTCACAGCACATCCCCCTTTCCAGATTGATGCAAACTTTGGTTTTACAGCAGCAATTGCAGAAATGCTTGTTCAAAGCACAATGAAGGATCTCTACTTGCTTCCTGCGTTGCCGCGAGATAAATGGGCCAATGGTTGTGTGAAGGGATTAAAAGCACGTGGCGGGGTAACGGTCAACATTTGCTGGAAAGAAGGAGACTTGCAAGAAGTTGGCCTCTTGTCAGAAAATTGGATTCCGATAATCACAAATGGCTTGGCGTTCAGCATCTCTCTCTCGCTCCGTAATCTCCACAGCCAGGGCTTCTCTccgaccggcggcgccgtcacccctcccccgcctccgtccgccgccactcgccgcccctcgcgtccagtcccgccgcTTTTCCATGCCTGCTTCCAGGAATTTGGGGCAATTGGGCTGCACACAATCGCTCTTACCTCTGCACAGTACGATGGCTATCACCTGCATGACGTCACACGTTGCTGTCAGTGCACGCGCTTGCTGCGAGCTGTCTCACGGTACGTGAGGAAGCTGTTGGATTTTCGTAGTTGCCTTTGA 2790 0.4287 MRHSCELPLLHRLLLVYCVVCSCLSPPLAAGELEELWKPTSTIDGPSRPLKITFDGPAKHWTDAIPIGNGRLGAMVWGGVPSELLQLNEDTLWTGTPGNYANKNASQAVAQVRKLVDDRKYSEATAEAVKLSGDPSDVYQLLGDIKLEFDDSHLAYSNESYHRELDLDTATVKIKYSVGDVEFTREHFASNPDQVIVTRFSASKPGSLSFTVYFDSKMHHSSRVSGQNQIMIEGSCPGRRVRPKVNSVDDPNPKGIQFSAVLDMQISKNKGVIHVLDDKKLRVEGSDWAILLLTASSSFDGPFTKPEDSKKDPTSESLSKMNSVKKNSYADLYARHLDDYQNLFHRVSLQLSKSSKTALGKSVLHGRKLVSSQTNISQMGGDVSIPTSARVKSFQTDEDPSFVELLFQYGRYLLISCSRPGTQVANLQGIWNKDVEPAWDGAPHLNINLQMNYLPSLSCNLHECQEPLFDFMSSLAVNGKKTAKVNYGANGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLCTHLWEQYIYTMDKDFLKNKAYPLLEGCTSFLLDWLIEGRGGLLETNPSTSPEHMFIAPDRKPASVSYSSTMDISIIKEVFSIIISAAEVLGRQNDGIIKRVTESLSKLPPTKVAGDGSIMEWAEDFEDPDVHHRHVSHLFGLFPGHTISLEKTPDLCKAVELSLIKRGDDGPGWSTTWKASLWAHLHNSEHAYRMIKHLIVLVDPTHERDFEGGLYSNLFTAHPPFQIDANFGFTAAIAEMLVQSTMKDLYLLPALPRDKWANGCVKGLKARGGVTVNICWKEGDLQEVGLLSENWIPIITNGLAFSISLSLRNLHSQGFSPTGGAVTPPPPPSAATRRPSRPVPPLFHACFQEFGAIGLHTIALTSAQYDGYHLHDVTRCCQCTRLLRAVSRYVRKLLDFRSCL 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02528 929 MobiDBLite consensus disorder prediction 302 322 - -
Cca02g02528 929 PANTHER - 38 819 - -
Cca02g02528 929 MobiDBLite consensus disorder prediction 845 865 - -
Cca02g02528 929 Pfam Glycosyl hydrolase family 65, N-terminal domain 52 301 IPR027414 -
Cca02g02528 929 MobiDBLite consensus disorder prediction 849 864 - -
Cca02g02528 929 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Cca02g02528 929 Gene3D - 289 766 IPR012341 GO:0005975
Cca02g02528 929 PANTHER ALPHA-L-FUCOSIDASE 2 38 819 - -
Cca02g02528 929 SUPERFAMILY Six-hairpin glycosidases 311 813 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02528 Cca-Chr2 46451050 46461829 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02528 K15923 - gmx:100810387 1427.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02528 02 46451050 46461829 Cca02g02528 02 46451050 46461829 ECH