Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02522 ATGGCAACCCTTTCCTCCTTCCTCTCCTCTTCCTCTCTTCCTCTTTTCCATCGCCACCCTTCTCCTTCCCCCTTCCGCCCCTCTCTCTCCCTATCCTTCTCTCACACTAAACCTCGTCTCCCCCTTCTCGTTCTCGCTTCCTCATCCCATTCCTTCCACGATTTCACCTCCAACTCCAAGAAATCAGTTCTTTCGGAGTTGATACAAGAGATTGAGCCTCTCGATGTCACTCACATCCAGAAAGATGTTCCACCAACCACAGCGGATGCCATGAAAAGGACCATATCTGGTATGCTGGGCTTGCTCCCATCTGATCAATTTCACGTTGTTATCGAGGCCTTGTGGGATCCTCTCTCCAAGTTACTCATTTCTTCAATGATGACCGGGTATACACTGCGCAATGTTGAATACAGGCTTTGTCTTGAGAAAAACCTTGATATGTATGAAAGAGATATAGAGATGCCAAGGGCAGAAAGTATGAAAGTGGACTTACAAGGGTTGATGCAGGACAGTGTAAATGTAATTGACTTTGGTAGAAATAAGAATTTGTCTTCCAAAGTTGAAAAGCTTCAGGAGGATGTTGACATACAAGAGCTTGGTGAAATATCTGCAGAAGCTCAACAATATATTTTTAATTTACAATCTCGCCTGTCTTCCATGAAAAAGGAACTACATGAAGCAAAGAGGAAAAGTGCTGCCCTTCAAATGCAACAGTTTGTTGGAGAGGAAAAGAATGATTTATTGGATTACTTGAGATCGCTTCAACCTGAACAGGTAGCTCAGCTTTCAGAATTTACATCCCCTGAGCTTAAGGACATCATCCTCTCTGTTGTCCATGGTCTCCTTGCTACCCTTTCTCCAAAGATGCATTCTAAACCTTCCACTATGTCAGAAAATACAACGGTTGGAGCGACAAATTGTGCTGAGGTTGTTGAGAACTCTGCTCTTCAATTTCAGCCTGTTATTTCATTAACTCGGGACTATCTTGCTCGCCTGCTCTTTTGGTGCATGCTGTTGGGACACTATCTTAGAGGTCTCGAGTGTCGATTGGAGTTGACGGAATTGCTATCCTTGACAAGTGATGCTGAGAATGATGCCTCTGGAAGTCAACCAATTGCTTGA 1122 0.4403 MATLSSFLSSSSLPLFHRHPSPSPFRPSLSLSFSHTKPRLPLLVLASSSHSFHDFTSNSKKSVLSELIQEIEPLDVTHIQKDVPPTTADAMKRTISGMLGLLPSDQFHVVIEALWDPLSKLLISSMMTGYTLRNVEYRLCLEKNLDMYERDIEMPRAESMKVDLQGLMQDSVNVIDFGRNKNLSSKVEKLQEDVDIQELGEISAEAQQYIFNLQSRLSSMKKELHEAKRKSAALQMQQFVGEEKNDLLDYLRSLQPEQVAQLSEFTSPELKDIILSVVHGLLATLSPKMHSKPSTMSENTTVGATNCAEVVENSALQFQPVISLTRDYLARLLFWCMLLGHYLRGLECRLELTELLSLTSDAENDASGSQPIA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02522 373 PANTHER MAR-BINDING FILAMENT-LIKE PROTEIN 32 370 - -
Cca02g02522 373 Pfam Protein of unknown function (DUF760) 64 145 IPR008479 -
Cca02g02522 373 Pfam Protein of unknown function (DUF760) 246 356 IPR008479 -
Cca02g02522 373 PANTHER OS02G0833400 PROTEIN 32 370 - -
Cca02g02522 373 Coils Coil 210 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02522 Cca-Chr2 46381720 46384805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02522 - - gmx:547534 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02522 02 46381720 46384805 Cca02g02522 02 46381720 46384805 ECH