Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02516 ATGGATAAGGGTAAGATCCAAGAGGTTATCGAGAAGCAAGTGCTCACGGTGGCGCGCGCCGTCGAGGACAAGATCGACGAGGAGATCGCCGCCCTCGAGCGCCTCGACGCCGACGACATCGAGGCCCTCCGCGAGCGCCGCCTCCAGCAGATGAAGAAGATGGCGGAGAATCGCTCCCGTTGGATCTCCCTCGGCCACTCCGAGTACTCCGAGATTCCCTCCGAGAAAGACTTCTTCTCCGTCGTCAAGGCCAGCGAACGCGTCGTATGCCACTTCTACCGCGAAAACTGGCCCTGCAAGGTTATGGACAAGCATTTAAATTTGTTGGCACAGCAGCATATCGAGACTCGATTCGTGAAACTCAACGCCGAGAAAAGTCCCTTTCTGGCTGAGAAGCTCAAGATCATTGTTCTTCCTACTCTTGCCCTCATAAAAAATGCCAAAGTGGATGATTACGTGGTTGGGTTTGATGAACTTGGTGGGACTGATGCGTTTAGCACGGAGGAGCTGGAAGAAAGATTGGCTAAAGCTCAAGTCATCTCTTATGAGGGTGAATCATCGCTCAATCATGCAAGGTCCAGTGCCAAAACCACAAGAAGTGTTCGGCAGAGCACCAGAGCAGACTCCTCCGATTCTGAGTAA 642 0.5296 MDKGKIQEVIEKQVLTVARAVEDKIDEEIAALERLDADDIEALRERRLQQMKKMAENRSRWISLGHSEYSEIPSEKDFFSVVKASERVVCHFYRENWPCKVMDKHLNLLAQQHIETRFVKLNAEKSPFLAEKLKIIVLPTLALIKNAKVDDYVVGFDELGGTDAFSTEELEERLAKAQVISYEGESSLNHARSSAKTTRSVRQSTRADSSDSE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02516 213 SUPERFAMILY Thioredoxin-like 5 180 IPR036249 -
Cca02g02516 213 Pfam Thioredoxin 75 156 IPR013766 -
Cca02g02516 213 Gene3D Glutaredoxin 48 182 - -
Cca02g02516 213 MobiDBLite consensus disorder prediction 185 213 - -
Cca02g02516 213 CDD Phd_like_TxnDC9 65 175 - -
Cca02g02516 213 Coils Coil 18 38 - -
Cca02g02516 213 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 213 - -
Cca02g02516 213 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 1 213 - -
Cca02g02516 213 MobiDBLite consensus disorder prediction 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02516 Cca-Chr2 46360177 46362356 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02516 - - gmx:100814116 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02516 02 46360177 46362356 Cca02g02516 02 46360177 46362356 ECH