Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02505 ATGGCACCTTTCATTTCCCTCTCTTTCTTCTTTCTCTTTCTCCACTACCCCCTCCTGTCCCTCTCAACCAACTCTGAAGGTGTAAAAATATTTAATCCAAATAATTGGGTGGGGAACGCTCTGCATGCTTTGAGAAGCAGGCTTTCTGATCCCAACAATGTGTTGCAGAGTTGGGACCCAACTCTGGTTAATCCCTGTACTTGGTTTCATGTTACCTGTGATTCCAACAATCATGTGATTCGCTTAGACTTGGGCAACTCAAATGTTTCCGGGACTCTGGGCCCAGAACTTGGCCAGCTACAACATCTGCAGTACCTGGAGCTCTACAGGAATGACTTAACAGGAAAGATTCCCGAGGAACTTGGTAACTTGAAATCACTTATCAGCATGGATTTGTATGATAACAAGTTCGAGGGGAAGATTCCAAAGTCATTTGGCAAGTTGAAGTCACTTAAATTCCTGCGGCTAAACAGCAACAAGTTGACAGGATCAATCCCAAGAGAACTCACTCGTCTCACTGATCTCAAAATGTTTGATGTTTCTAATAATGACCTCTGTGGAACGATACCAGTAGAGGGCAACTTTGAATCTTTTCCGATGGAAAGTTTTGAAAACAACAGGTTTAGTGGTCCCGAGCTGATAGGACTTGTTCCATATGATTTTGGATGCTGA 672 0.433 MAPFISLSFFFLFLHYPLLSLSTNSEGVKIFNPNNWVGNALHALRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQYLELYRNDLTGKIPEELGNLKSLISMDLYDNKFEGKIPKSFGKLKSLKFLRLNSNKLTGSIPRELTRLTDLKMFDVSNNDLCGTIPVEGNFESFPMESFENNRFSGPELIGLVPYDFGC 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02505 223 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 28 220 - -
Cca02g02505 223 Pfam Leucine Rich Repeat 102 124 IPR001611 GO:0005515
Cca02g02505 223 Pfam Leucine rich repeat N-terminal domain 39 74 IPR013210 -
Cca02g02505 223 Gene3D Ribonuclease Inhibitor 38 213 IPR032675 -
Cca02g02505 223 SUPERFAMILY L domain-like 40 211 - -
Cca02g02505 223 Pfam Leucine rich repeat 129 185 IPR001611 GO:0005515
Cca02g02505 223 PANTHER LRR AMINO-TERMINAL DOMAIN PROTEIN 28 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02505 Cca-Chr2 46259644 46261890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02505 35 206 Receptor kinase-like Gene Family AT1G71830 63.372 2.04e-68 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02505 - - gmx:100306422 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02505 02 46259644 46261890 Cca02g02505 02 46259644 46261890 ECH