Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02504 ATGAAGAGGGCTTTTGTAACGAACCCTGCCCAGCTTTCACATTTGATGATGCAGAGTCAGAGGCAGTTGATGTTGGTGCAGCATGTCATTCATCCAATCAAACCTCCTTCTTTTCTCTGCAACAAACTGCACTCTACACCTTCTTTTCGATTGCCACATtttctgaggaaacccagacagtatcaaatctcttcatctttttgttcttcttcttcttcttcttcttcctcCACTTCATCCGCTGCTGCAACCTCCGTCTCCAAGGTTGGCTTTGTGGGTTGGTATTTGGGGATGATTAAGTCATGGCCTATTTTGACTAAAAGTGTTACTTCTTCACTTATTTACATTGCTGCTGATTTATCCTCCCAGACTATTGTGCGGGAATCTTCAGAACCTTTTGATTTTATAAGAACTTCGCGCATGGCGGGATATGGGATGATCATTTTAGGACCATCACTGCATTTCTGGTTCAATTTTGTGTCAAAGCTTTTCCCAAGGAGGGATCTTTTCTCTACATTGAAGAAAATGGCCATGGGTCAGACACTTTATGGACCGGCCATGACTGTTATTTTCTTCTCCTTGAATGCACGTTTACAAGGTGAAACCGGTTCAGAGATTGTTGCACGTTTAAAACGTGATTTGCTTCCTACATTGTTGAGCGGGATTATGTACTGGCCTATATGTGATTTCATAACTTTTAGGTTCATTCCTGTCCATTTACAGCCATTAGTCAGCAATTCATTTTCGTACTTGTGGACCGTTTATATGACCTATATGGCAAGCCTAGAGAAAGCAAGCGCACTGTAA 807 0.3854 MKRAFVTNPAQLSHLMMQSQRQLMLVQHVIHPIKPPSFLCNKLHSTPSFRLPHFLRKPRQYQISSSFCSSSSSSSSSTSSAAATSVSKVGFVGWYLGMIKSWPILTKSVTSSLIYIAADLSSQTIVRESSEPFDFIRTSRMAGYGMIILGPSLHFWFNFVSKLFPRRDLFSTLKKMAMGQTLYGPAMTVIFFSLNARLQGETGSEIVARLKRDLLPTLLSGIMYWPICDFITFRFIPVHLQPLVSNSFSYLWTVYMTYMASLEKASAL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02504 268 Pfam Mpv17 / PMP22 family 198 256 IPR007248 GO:0016021
Cca02g02504 268 PANTHER OS12G0508100 PROTEIN 5 266 - -
Cca02g02504 268 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 5 266 IPR007248 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02504 Cca-Chr2 46252761 46257361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02504 88 268 Miscellaneous Gene Families AT2G14860 74.586 1.26e-105 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02504 K13348 - gmx:100816797 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02504 02 46252761 46257361 Cca02g02504 02 46252761 46257361 ECH