Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02502 ATGGTGGCTGCCATTTCGGAACACCCTTCTCACAAAGACAATGGCACCATCCCAAGAAGACCAAAGGGTAGGCAAGTTTCTTCAAGGTACATGTCTCACTCGCCTTCACCTTCTTcaaccacaacaacaacaacaacaacaactacttcaacttcaacctcaacatcaaccacaaGTTCTTCTTCTCGCCGATTCCCTTCCCCTCTTCTCTCGCATTCCACCAATTCCTCCACCCCTTTGGTCCCCAAGCGTTCCCAATCGGTCGACCGACGCCGCCCGCGGCCAACCACGCCGCTTCCCGAGGCGGCCAAGCTTCTCGTGACCTCCACCCGGAGCCTGTCGGTTTCCTTCCAAGGTGAGGCCTTTTCGCTGCCCATTAGCAAGACCAAGGCGGCGGCGGCCACCCCGCCGCCGCGGAAGGCTGCCACGCCGGAGCGGAGGCGGGCCACTCCGGTGAGGGGGGAGAATTCAAGGCCGGCAGATCAGCACCGGTGGCCGGCGAGGACCCGGCAGGCGGATCACCTCTCCAAGAGCGTGGATTGCAGTGACAGGAACAAGGTTGCTGGGAATGGGTTTGGGAAAGTGGTGAGGGCTTTGCAGCAGTCTATGGTGGTGGAGGGTGATAGGAGAAGGGCTTCTTTTGATGGCTTGGGAGGGTTGAGTTTGGATTTGGGGAAAGCTCAATTGTTGAAGGGCAATGCTAATTCTGTtactactactactactagtagtaGAACTGATAATGATAATCATGATGATGTGAATTTGGTGAGTAAGTCTTCATTGGCTTGTGATCTCACTGCTTCTGATACTGATAGTGTTTCCTCTGGGAGCACTTCAGGAGCACATGACTCTTCTGGGGCTGCCAAGGCACTTAAGGAGCCTCGCGGCATTGTTGTGTCTGCAAGGTTTTGGCAGGAGACTAATAGCCGCCTTCGCCGGCTGCAGGACCCTGGTTCGCCCTTGTCAACCAGCCCTGCTTCGAGAATTGGGGTCCCGGCAAAGAATTCTCAGTTGAAAAGGTATAATAGTGATGGCCCTGTGTTGTCACCGCGGACCATGGCTTCTCCTGTCAGGGGGAGTGTGAATGCTCGGCCTGCTTCGCCGAGTAAGCTTTGGGCGGGATCTTCCCCGTCGAGGGGGATGCCTAGTCCTGCTAGGGTGAGAAGCACGGTTGCCAGCTCCATCAATAGTAGTTCTGGTAACACACCCTCAATTCTTAGCTTCTCGGCCGATGTGCGGAGAGGGAAGATTGGGGAAGATCGGATATTCGACGCCCATACGTTGAGGCTGCTGTACAACCGGTATGTGCAGTGGAGGTTTGTGAATGCAAGGGCGGATGCTACATTTATGGTGCAGAAACTGAATGCTGAGAGACATTTGTGGAATGCATGGGTAACAATCTCAGAACTCCGACATTCAGTCATACTTAAAAGAATCAAGCTTGTATTGCTGAGGCAAAAATTGAAGTTAACTTCCATTCTAAAAGGACAGATTTCTTATTTGGAGGAATGGGCTGTTCTAGATAGAGATCACTCCAATTCTTTGCTTGGAGCAACTGAAGCTTTGAAGGCCAGTACCCTCCGTCTTCCGGTTGTTGAAAAAGCAATAGCTGATGTACCAAATCTAAAAGATGCTTTGGGGTCAGCAGTTGATGTGGAAGAAACTAACTGTTTGGTGGCGGAAATCCTAAAGGTGACCTCAAAAGAAAGGTTTTTGCTTGAACAATGCAAGGAGTTTTTGTCCTCGTTAGCAGCTATGCAGGTCAAGGATTGTAGCTTAAGAACACATATGTTACAACTTTCTCGCGTGCCAACTTCCAGCTGCCTGACAACACGTGTGTAG 1845 0.497 MVAAISEHPSHKDNGTIPRRPKGRQVSSRYMSHSPSPSSTTTTTTTTTTSTSTSTSTTSSSSRRFPSPLLSHSTNSSTPLVPKRSQSVDRRRPRPTTPLPEAAKLLVTSTRSLSVSFQGEAFSLPISKTKAAAATPPPRKAATPERRRATPVRGENSRPADQHRWPARTRQADHLSKSVDCSDRNKVAGNGFGKVVRALQQSMVVEGDRRRASFDGLGGLSLDLGKAQLLKGNANSVTTTTTSSRTDNDNHDDVNLVSKSSLACDLTASDTDSVSSGSTSGAHDSSGAAKALKEPRGIVVSARFWQETNSRLRRLQDPGSPLSTSPASRIGVPAKNSQLKRYNSDGPVLSPRTMASPVRGSVNARPASPSKLWAGSSPSRGMPSPARVRSTVASSINSSSGNTPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLVLLRQKLKLTSILKGQISYLEEWAVLDRDHSNSLLGATEALKASTLRLPVVEKAIADVPNLKDALGSAVDVEETNCLVAEILKVTSKERFLLEQCKEFLSSLAAMQVKDCSLRTHMLQLSRVPTSSCLTTRV 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02502 614 MobiDBLite consensus disorder prediction 1 104 - -
Cca02g02502 614 MobiDBLite consensus disorder prediction 128 182 - -
Cca02g02502 614 MobiDBLite consensus disorder prediction 311 386 - -
Cca02g02502 614 MobiDBLite consensus disorder prediction 311 344 - -
Cca02g02502 614 MobiDBLite consensus disorder prediction 141 181 - -
Cca02g02502 614 MobiDBLite consensus disorder prediction 268 293 - -
Cca02g02502 614 MobiDBLite consensus disorder prediction 27 84 - -
Cca02g02502 614 Pfam QWRF family 273 574 IPR007573 -
Cca02g02502 614 PANTHER QWRF MOTIF-CONTAINING PROTEIN 2 14 612 - -
Cca02g02502 614 MobiDBLite consensus disorder prediction 268 285 - -
Cca02g02502 614 PANTHER AUGMIN FAMILY MEMBER 14 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02502 Cca-Chr2 46230215 46235639 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02502 - - gmx:100815206 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02502 02 46230215 46235639 Cca02g02502 02 46230215 46235639 ECH