Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02500 ATGGTGGTCTGCAAATGTCGCAAGGCTACTAAGTTATATTGTTTCGTGCACAAAGTTCCTGTCTGCGGGGAATGTATCTGCTTCCCGGAGCACCAAATCTGCGTGGTCCGGACTTATTCAGAATGGGTTATAGATGGGGAGTATGATTGGCCCCCAAAATGCTGCCAGTGCCAGGCTGTTTTAGAAGAGGGGGATGGTTCTCAAACAACTCGACTGGGTTGCTTGCATGTTATCCACACAAATTGCTTGGTCTCACATATCAAGAGTTTTCCTACACATACTGCCCCAGCAGGATATGCATGTCCTTCATGTACTACTTCGATATGGCCTCCCAAAAGTGTGAAAGATTCGGGATCCCGTCTTCATTCCAAGTTGAAGGAAGCAATCATGCAGTCTGGTATGGAAAAGAATGTTTTTGGAAATCATCCAGTTTCATTGCCAGTGACAGAATCACGAAGTCCTCCACCTGCTTTTGCTTCAGATCCATTGGTTAATAGGGAAAATCATGGAAACTCAGACTCGGTTGATGGATCACTTGCAACTGGGTCAGAACTACCTAAAATTTCAGTGACAGATATTGTGGAGATAGATGGTGCTAATTCAGGAGGAAATTTCATGAAAAGCTCAAGTCCTGTTGTTCCCGGTGCCACCACAAGGAAGGGCTCAGTCCACGTTGAACGACAGAATTCTGAAATTTCTTACTATGCTGACGATGAAGATGGAAATCGTAAAAAGTACACAAAACGAGGTCCATTCCACCATAAGTTTCTTAGAGCTTTGCTTCCTTTCTGGTCTCCTGCTTTACCCACTCTACCAGTGACTGCACCTCCAAGGAAAGAAGCATCAAATGCAACCGAAACCTCAGAAGGCCGTACACGGCATCAAAGATCATCTAGGATGGACCCAAGAAAAATTCTTCTCCTGATTGCTATTATGGCTTGCATGGCAACTATGGGTATATTGTATTACAGACTAGTGCAAAGGGGTCCAGGGGATGAGCTGCTTCTAAATGACGAATAA 1020 0.4461 MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPKCCQCQAVLEEGDGSQTTRLGCLHVIHTNCLVSHIKSFPTHTAPAGYACPSCTTSIWPPKSVKDSGSRLHSKLKEAIMQSGMEKNVFGNHPVSLPVTESRSPPPAFASDPLVNRENHGNSDSVDGSLATGSELPKISVTDIVEIDGANSGGNFMKSSSPVVPGATTRKGSVHVERQNSEISYYADDEDGNRKKYTKRGPFHHKFLRALLPFWSPALPTLPVTAPPRKEASNATETSEGRTRHQRSSRMDPRKILLLIAIMACMATMGILYYRLVQRGPGDELLLNDE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02500 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 142 IPR013083 -
Cca02g02500 339 MobiDBLite consensus disorder prediction 165 179 - -
Cca02g02500 339 SUPERFAMILY RING/U-box 37 116 - -
Cca02g02500 339 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
Cca02g02500 339 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 336 IPR039043 -
Cca02g02500 339 MobiDBLite consensus disorder prediction 284 299 - -
Cca02g02500 339 MobiDBLite consensus disorder prediction 142 181 - -
Cca02g02500 339 MobiDBLite consensus disorder prediction 272 299 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02500 - - gmx:100805734 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02500 02 46172574 46177135 Cca02g02500 02 46172574 46177135 ECH