Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02495 ATGAAAAATCAACTTTTGTTGTTATCCACTTTCCTTTCATTTCTGATTCTTCCAACTGCTAGCCAGAAACATGCATGTGACAAAGGCTCTTCCAAGACTAGTAACTTTCCATTTTGCAACACTTCCCTAACCTATGAAGCCAGGGCCAAGGACTTGGTGTCACGCCTAACACTTGAAGAAAAGGCACAACAATTAGTTAACCCTTCTGCGGGTATTTCCCGGCTTGGTGTGCCTGCTTATGAATGGTGGTCAGAGGCACTTCATGGTGTCTCCAACTTAGGGCCAGGGACACGTTTTGACAAGAGGGTCCCTGGTGCCACTAGTTTCCCAGCAGTGATACTATCAGCTGCAAGCTTCAATGTAAGTTTGTGGCACAAGATGGGGCAGGTTGTGTCAACCGAGGCTAGAGCCATGTACAATGTGGACTTGGCTGGTTTGACATTTTGGAGTCCCAATGTGAATGTGTTTCGTGATCCTAGGTGGGGGCGTGGCCAGGAAACTCCAGGGGAAGACCCCTTTGTGGTGTCTAGATATGCTGTTAAGTATGTTCGTGGCCTACAAGAAGTTGAGGATGAAGCAAGTGCTCAAGCTGATAGGCTCAAGGTTTCAAGCTGTTGTAAGCATTATACTGCTTATGACCTTGACAACTGGAAAGGCATTGATCGCTTCCATTTTGATGCAAAGGTGACAAAGCAAGACTTGGAGGACACGTATCAACCTCCGTTCAAGAGTTGTGTGGAGGAGGGGCATGTTAGTAGTGTAATGTGTTCTTATAATAGGGTGAATGGGATTCCTACATGTGCTGACCCAAACCTTCTCAAAGGGGTAATAAGAGGCCAATGGGGTCTAGACGGATATATTGTTTCAGATTGTGATTCAGTGGAAGTCTATTACAATGCAATTCATTACACAGCAACTCCTGAAGATGCTGTGGCCCTTGCGCTGAAAGCAGGTTTAAACATGAACTGTGGCGATTTTCTAAAAAAATACACTGCAAATGCAGTAAACTTGAAAAAAGTAGATGTAGGTACTGTAGACCAGGCCTTGGTGTACAACTACATAGTCCTAATGAGATTGGGCTTCTTTGATGACCCCAAGTCACTTCCATTTGCAAACCTTGGCCCATCTGATGTATGTACTAAAGACAATCAGCAACTGGCTCTAGATGCTGCAAAGCAAGGAATAGTTTTGCTGGAAAATAATGGAGCTCTTCCCTTGTCACAAACTAACATTAAAAAATTGGCTGTGATTGGACCAAATGCCAATGCCACCACAGTTATGATTAGCAACTATGCTGGCATACCTTGCCGCTATACTAGTCCTTTACAAGGACTACAGAAGTACGTTTCTTCTGTAAACTATGCACCTGGTTGTAGCAACGTTAAATGTGGTAATCAGAGCCTCATTGCAGCAGCAGTTAAGGCAGCAGCCTCTGCTGATGCAGTGGTGTTGGTTGTGGGATTAGACCAATCTATTGAAGCAGAGGGTTTGGATAGAGAAAACTTGACATTACCTGGATTTCAAGATAAGCTTGTGAAAGATGTGGCTGGTGCTACCAAAGGAAAAGTGATTTTAGTCATAATGGCAGCTGGTCCAATTGACATTTCTTTCACCAAAAGTCTCAGTAACATTGGGGGAATATTGTGGGTAGGGTATCCTGGTCAAGCTGGAGGGGATGCCATAGCACAAGTTATATTTGGAGACTACAACCCAGGTGGTAGGTCCCCTTTTACATGGTATCCACAATCCTACGTTGATCAAGTGCCCATGACAGATATGAACATGAGAGCCAACAGCAGTAGAAATTTCCCTGGAAGAACCTATAGGTTTTACAAAGGGGATCCCCTCTATGAATTTGGTCATGGATTAAGCTACTCCACATTCTCCATGTATGTTGCATCTGCTCCCTCCACCATAATGGTTCAAACCACATCCATTTCTGAACCACATAACATCTTCTCTTCCAACTCAGCCACACAACATGAATCTCTCTCTGAAGGTCAAGCAATTGACATTTCCACCATCAATTGCCAAGACTTGACATTTTTGCTTGTCATTGGTGTGAAGAACAAGGGACCCTTTGATGGATCACATGTGGTGTTAGTGTTCTGGGAGCCAGCAACTTCAGAGGTGGTGACTGGGGCTCCAATTAAACAACTTATAGGATTTGAAAGAGTGCAAGCTGTGGTGGAGATGACAGAGTTTGTAACAGTGAAAATTGATATGTGCCAACTGCTAAGTAACGTGGATAGTGATGGCAAAAGAAAGTTGATCATTGGACAACACACTATTTTGGTTGGCTCTTCCAGTGAAACTCAAGTTAGACACCACATTGATGTCAAACTTTCAGCGAGTAGTATGAAAGGAGAAAAAATCACGTCTGAATAA 2388 0.4363 MKNQLLLLSTFLSFLILPTASQKHACDKGSSKTSNFPFCNTSLTYEARAKDLVSRLTLEEKAQQLVNPSAGISRLGVPAYEWWSEALHGVSNLGPGTRFDKRVPGATSFPAVILSAASFNVSLWHKMGQVVSTEARAMYNVDLAGLTFWSPNVNVFRDPRWGRGQETPGEDPFVVSRYAVKYVRGLQEVEDEASAQADRLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQPPFKSCVEEGHVSSVMCSYNRVNGIPTCADPNLLKGVIRGQWGLDGYIVSDCDSVEVYYNAIHYTATPEDAVALALKAGLNMNCGDFLKKYTANAVNLKKVDVGTVDQALVYNYIVLMRLGFFDDPKSLPFANLGPSDVCTKDNQQLALDAAKQGIVLLENNGALPLSQTNIKKLAVIGPNANATTVMISNYAGIPCRYTSPLQGLQKYVSSVNYAPGCSNVKCGNQSLIAAAVKAAASADAVVLVVGLDQSIEAEGLDRENLTLPGFQDKLVKDVAGATKGKVILVIMAAGPIDISFTKSLSNIGGILWVGYPGQAGGDAIAQVIFGDYNPGGRSPFTWYPQSYVDQVPMTDMNMRANSSRNFPGRTYRFYKGDPLYEFGHGLSYSTFSMYVASAPSTIMVQTTSISEPHNIFSSNSATQHESLSEGQAIDISTINCQDLTFLLVIGVKNKGPFDGSHVVLVFWEPATSEVVTGAPIKQLIGFERVQAVVEMTEFVTVKIDMCQLLSNVDSDGKRKLIIGQHTILVGSSSETQVRHHIDVKLSASSMKGEKITSE 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02495 795 Pfam Glycosyl hydrolase family 3 N terminal domain 102 324 IPR001764 GO:0004553|GO:0005975
Cca02g02495 795 Gene3D - 380 627 IPR036881 GO:0004553|GO:0005975
Cca02g02495 795 Gene3D - 48 369 IPR036962 GO:0004553|GO:0005975
Cca02g02495 795 SMART Fn3_like_2 698 770 IPR026891 -
Cca02g02495 795 SUPERFAMILY (Trans)glycosidases 36 394 IPR017853 -
Cca02g02495 795 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 395 628 IPR036881 GO:0004553|GO:0005975
Cca02g02495 795 PRINTS Glycosyl hydrolase family 3 signature 109 128 IPR001764 GO:0004553|GO:0005975
Cca02g02495 795 PRINTS Glycosyl hydrolase family 3 signature 202 218 IPR001764 GO:0004553|GO:0005975
Cca02g02495 795 PRINTS Glycosyl hydrolase family 3 signature 276 294 IPR001764 GO:0004553|GO:0005975
Cca02g02495 795 Pfam Glycosyl hydrolase family 3 C-terminal domain 395 625 IPR002772 GO:0004553|GO:0005975
Cca02g02495 795 Gene3D Immunoglobulins 664 784 IPR013783 -
Cca02g02495 795 Pfam Fibronectin type III-like domain 698 770 IPR026891 -
Cca02g02495 795 PANTHER BETA-D-XYLOSIDASE 5-RELATED 6 780 - -
Cca02g02495 795 PANTHER SUGAR HYDROLASE-RELATED 6 780 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02495 Cca-Chr2 46124289 46127801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02495 12 786 Glycoside Hydrolase AT3G19620 69.466 0.0 1139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02495 K15920 - gmx:100817869 1450.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02495 02 46124289 46127801 Cca02g02495 02 46124289 46127801 ECH