Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02493 ATGTCTCATCGAGACTCTGATTCCAAGCGTCGCCATTCTAAGTTCGATCGAGAACCAAGTCCCAAGAGATATAGAAGAGATGGTAAACAAGAAAGAGAGAGGGACAGGAACAGAGTAACCTCAGATAGAGTAGATCAGAGTCAGAGAAACCCACCACTGCCACATCATCATTCTAGGCGAGAATCTTTGGATGCCGCTCCCAAGAAATCAAATTCGAATGGTCATCATGACCCACCCAAGCATTTCTCTCAACCACCAAGATCTCGCTCTTATTATCAGCATGATGAACTTACTGGGCAGGTTGGACGAAGCAATGGTCAAAGAGAAGCTGGTGAAAAGAGTAAAGAGAATAATGAAAGGGTGGAGCCAGGTCAAAGTAGAGAGCTAAGAGAGGAGAAATCACAGGTGAAACTGGATGATAATTTACAGAAAAGAAATGGTTTTTCTGAAAGAAAAGATGATCCACCTCCTACTCTGAGGAAAAGGCGGGCATTTAGGGAGAAGAAGATTCCTGTGGATTCAACAAATGCTAATCCACCTGCATTGGTGGCGGTTAAGTCAAGCCAGACTGACCATCTTCCGGAAAGGAATGAAAGGAAGGAGGAAAGAAGCAGCAATCCTCACCATCTTGATAGACCTGAGAAGCAAATTACAGAGGACAGAGCACTTAATAAGAGTGAAGCTAGGAGGGATGGCTTTTCATCAAGAGGAAGGTACGGGGGCAGTGGAGGCATTAGCAATTACAGGGGAAGAGATAAATTTAATGGAAGACAAGGTTATCATCCTTTTAAGACGCGGGTTGAGAAGTGGAAACATGATTTGTATCAAGAGGTTAACAAGGATCCTATTCCAAAGAATGAGGATGACCAGATTGCGAAGTTAGAAGCACTCTTGGCTTCATAA 903 0.4363 MSHRDSDSKRRHSKFDREPSPKRYRRDGKQERERDRNRVTSDRVDQSQRNPPLPHHHSRRESLDAAPKKSNSNGHHDPPKHFSQPPRSRSYYQHDELTGQVGRSNGQREAGEKSKENNERVEPGQSRELREEKSQVKLDDNLQKRNGFSERKDDPPPTLRKRRAFREKKIPVDSTNANPPALVAVKSSQTDHLPERNERKEERSSNPHHLDRPEKQITEDRALNKSEARRDGFSSRGRYGGSGGISNYRGRDKFNGRQGYHPFKTRVEKWKHDLYQEVNKDPIPKNEDDQIAKLEALLAS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02493 300 MobiDBLite consensus disorder prediction 86 107 - -
Cca02g02493 300 MobiDBLite consensus disorder prediction 1 83 - -
Cca02g02493 300 MobiDBLite consensus disorder prediction 108 170 - -
Cca02g02493 300 MobiDBLite consensus disorder prediction 191 234 - -
Cca02g02493 300 MobiDBLite consensus disorder prediction 1 260 - -
Cca02g02493 300 PANTHER OS03G0203000 PROTEIN 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02493 Cca-Chr2 46116086 46118567 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02493 - - gmx:100777449 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02493 02 46116086 46118567 Cca02g02493 02 46116086 46118567 ECH
Cca06g02038 06 35637714 35640068 Cca02g02493 02 46116086 46118567 PCT