Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02491 ATGGTCCCAGTGGAAAAAGAGGTCCCGAGTTTTACGTTTGCGGCTGGTGTTGCAACAATGGTTTGTAACACGAACAAGAGCAACAAGAAGGAGAAAGACCTTGAGTTTTTCTTCGAGGATGATTTCAACGAAAGTGCACAACAAGATATtgaaagtgcaaagttaacgatagagagtgaaagtagcagtgaTGATGACGAGGGAAATGATACAACGCACCGTCGTCACTCTTTCACTTCTCAGCAATGGCCTCGAAGTTACAATGAAAAGATGAAGGTTGCTGCAGAAGGCTGCAACTTGTTGTGCATTACCATTTGCCTTTTACTCATCTCAGGCCTCAGCGTCCATTCTTTGTCTTATGATTATTCTGCTAATATAAAGTGTTTGGCAGAACCTGAGAGAGCACAGTATGGAGGAGGCATTATAGTAAATCCAGGATTTGATCACAACATAAAGGGTTGGACAGTATTTGGAAAAGGAGCAATCAAGGAACGAATTTCCAATGGAGGCAATAGATTCATCGTTGCATACAACAGAACACAGCCATTGGATAGTTTCTCTCAGAAGGTCCATCTTAAGAAAGGAATGATATACACCTTTTCTGCTTGGTTTCAGCTCAGTGAAGGAAGTGACACTGTGTCAGTTATATTCAAATCAAAAGGAAGTGAAATAGGTGGCCAAGTGATAGCAAAACATGGATGCTGGACTCTTCTAAAAGGCGGCATAGTTGCAAACTTCTCCAGCCCCGTTGAGATTTTTTTTAAGAGCAAGAATTCCAATGTGGAAATATGGGCTGACAATGTCTCCTTACAACCATTCACTAAAAAGCAGTGGAGATCACTGCAAGACGCCAGCATTGAGAGGATACGTAAGAGGAAATTGAGATTGCAGATAACTTACGTAAATGGAATAGCAATGAAAGGAGCTACAGTTATCGCGAGACCAGCAAAGATGAGCTTCCCATTTGGATGTGGAATGAACCATTATATCCTCACAAACAAAGACTACCAGAACTGGTTTGTGTCAAGGTTCAAATTTACAGCTTTCACCAATGAGATGAAGTGGTATAGTACGGAGAAAAAGCAAGGCCAGGAAAACTACACTATCTCAGATGCCATGATGAATTTTACAAAAAAGAATGGCATTTCTGTTAGAGGCCATAATATTTTATGGGACAATCCAAAGCAGCAGCCTGAATGGGTTAAGTCCCTATCACCTTTAGAATTAGCAGAAGCAGCAACAAGAAGAATAGTATCTGTGGTTTCAAGATACAAAGGAGAACTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCACTTTTATGAGGACAAATTTGGTGAAAATGCCTCTGCAATAGCATATGCAACAGCCTATGAGCTTGATCCAAAACCAAAGATGTTCCTAAATGAGTATAACACTATTGAACATAGTAGGGATGAGGCTGCCAGCCCAGTCAAATATATCAAGAAACTTGAGGAGATTCTGTCATTTCCAGGAGTTGCTGGAATGTCAGCAGCAATAGGGTTGCAAGGCCATTTTGGTTCTGGCCACCCAAATCTTGCTTATATGAGGTCAGGTCTTGATCTTCTTGCTTCAACTGGACTTCCAATATGGCTCACAGAAGTGAGCGTGGGTCCAAGTCCAAGTCAGGCAGAGTACTTGGAAGAGATACTAAGAGAGGGATACTCTCATCCTGGTGTTGAAGGGATTATAATGTTTTCTGGTCCAGCACAAGCTGGTTTCAACGATACTACTTTGGCAGATGAGAATTTCAAAAATACTCCTGCTGGAGACGTTGTGGACAAGCTGATTCAGGAGTGGAGAACTGGGTCTCTTGTTGCCACTGCAGATGACAGAGGATTTGTAGATATTTCACTGCACCATGGAGACTATGATGTAACTGTTAAAAATCCTCTAACCCACTTCTCTAGAAAACTGAGTCTAAGTGTAGAGAAAGGCTTTTCAATGGAAACAATTCATGTGAAAATGCGTGTATAA 2004 0.4057 MVPVEKEVPSFTFAAGVATMVCNTNKSNKKEKDLEFFFEDDFNESAQQDIESAKLTIESESSSDDDEGNDTTHRRHSFTSQQWPRSYNEKMKVAAEGCNLLCITICLLLISGLSVHSLSYDYSANIKCLAEPERAQYGGGIIVNPGFDHNIKGWTVFGKGAIKERISNGGNRFIVAYNRTQPLDSFSQKVHLKKGMIYTFSAWFQLSEGSDTVSVIFKSKGSEIGGQVIAKHGCWTLLKGGIVANFSSPVEIFFKSKNSNVEIWADNVSLQPFTKKQWRSLQDASIERIRKRKLRLQITYVNGIAMKGATVIARPAKMSFPFGCGMNHYILTNKDYQNWFVSRFKFTAFTNEMKWYSTEKKQGQENYTISDAMMNFTKKNGISVRGHNILWDNPKQQPEWVKSLSPLELAEAATRRIVSVVSRYKGELIAWDVMNENLHFHFYEDKFGENASAIAYATAYELDPKPKMFLNEYNTIEHSRDEAASPVKYIKKLEEILSFPGVAGMSAAIGLQGHFGSGHPNLAYMRSGLDLLASTGLPIWLTEVSVGPSPSQAEYLEEILREGYSHPGVEGIIMFSGPAQAGFNDTTLADENFKNTPAGDVVDKLIQEWRTGSLVATADDRGFVDISLHHGDYDVTVKNPLTHFSRKLSLSVEKGFSMETIHVKMRV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02491 667 MobiDBLite consensus disorder prediction 58 74 - -
Cca02g02491 667 PANTHER GLYCOSYL HYDROLASE 124 664 IPR044846 GO:0004553|GO:0005975
Cca02g02491 667 Gene3D - 129 273 - -
Cca02g02491 667 PANTHER HYDROLYZING O-GLYCOSYL COMPOUNDS, PUTATIVE-RELATED 124 664 - -
Cca02g02491 667 MobiDBLite consensus disorder prediction 54 81 - -
Cca02g02491 667 Pfam Carbohydrate binding domain 140 222 IPR003305 GO:0016798
Cca02g02491 667 SUPERFAMILY (Trans)glycosidases 306 612 IPR017853 -
Cca02g02491 667 SMART glyco_10 353 604 IPR001000 GO:0004553|GO:0005975
Cca02g02491 667 Pfam Glycosyl hydrolase family 10 316 550 IPR001000 GO:0004553|GO:0005975
Cca02g02491 667 SUPERFAMILY Galactose-binding domain-like 138 272 IPR008979 -
Cca02g02491 667 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 312 605 IPR001000 GO:0004553|GO:0005975
Cca02g02491 667 Gene3D Glycosidases 309 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02491 Cca-Chr2 46077560 46087504 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02491 116 643 Glycoside Hydrolase AT4G33840 49.438 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02491 - - gmx:100802367 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02491 02 46077560 46087504 Cca02g02491 02 46077560 46087504 ECH