Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02484 ATGGCAGGTGGAGGAGGAAAAGTTGACGACTTCCAACCTCATCCCGTGAAGGAACAACTTCCCGGCGTTGATTACTGTGTTACCAGCTCACCCTCATGGCCTGAAGGGATCATTCTTGGGTTTCAGCATTACCTCGTTGTGCTTGGTACCATTGTCATTGTTTCCACCTTACTCGTCCCTTTGATCGGTGGTGGCAATGTGGAGAAGGCTGAAATGATACAAACTCTACTTTTTGTTGCTGCCATTAACACACTGCTGCAAACGTGGTTTGGAACACGTCTTCCTGTGGTCGTGGGGGCATCCTATGCTTTCCTCATCCCTGCTGTTTCCATTGCTTTTTCCTCCCGAATGAGTCTTTTTGCAGATCCACACCAGAGATTTAAGCAATCCATGAGAGCCATACAAGGGGCACTTATTGTTGCATCGTTATTTCAAATCATCATTGGCTTTTTTGGCTTTTGGAGGATTTTTGCCAGGTTTCTCTGCCCGCTTAGTGTGGTCCCCCTTGTCACACTTACTGGCCTAGGACTATTTATATTAGGATTTCCAAGACTGGCAGATTGTGTTGAAATTGGTCTCCCTGCATTGATTATCCTTGTAATCCTGTCCCAGTACATTCCCCAAATGATGAAATCAAGAGCACCAGATCGATTTGCAATCATAGTCTCAATTGGAATTGCATGGGTATTTGCTGAAATTTTGACTGCAGCTGGTGCATACAATAAAAGATCGCCTAAAACTCAATTGAGTTGTCGTACAGATCGATCTGGGTTAATTAGTGCCGCTCCTTGGATAAGAGTTCCATATCCATTTCAATGGGGACGTCCTTCTTTCAATGCTGGTGATACTTTTGCTATGGTTGCTGCTTGTCTTGTTGCAATTGTAGAGTCAACAGGGACATTCATTGCAGCATCAAGATTTGGCAGTGCTACCCCTGTTCCACCATCTGTGCTTAGTCGTGGTGTAGGTTGGCTGGGCATAGGTACTCTTTTGGATGGCTTTTTTGGCACAGCAACTGGATCAACTGCATCAGTTGAAAATGCAGGACTCTTGGGTTTAACAAGAGTAGGAAGTCGCAGAGTCATTCAAATATCCGCCGTATTCATGCTTTTCTTCTCTATATTAGGAAAATTTGGAGCAGTTCTTGCTTCAATACCTTTGCCAATTATAGCAGCTATTTACTGCGTTCTCTTTGCCTTCGTAGTATCAGCAGGGCTTGGTTTTCTTCAATTCTGCAACCTAAACAGTTTTAGGTCAATGTTCATCCTCGGCTTCTCTCTCTTCATGGGTTTATCTGTTCCACAGTATTTCAACGAATATCTGTTGCTATCTGGACATGGACCTGTCCATACCCGTACCACTGCGTTCAACAATATAGTGCAAGTGATTTTCTCATCACCAGCAACTGTGGCAATTATAGTTGCTTACTTGTTGGATTTAACAGTGAGTCGTGGAGACAGCTCAACTCGTCGAGACAGTGGGAGACACTGGTGGGAAAAATTCAGGACCTTCAATCAGGATACTAGAAGTGAAGAGTTCTATTCACTTCCTTTAAACCTCAACAGATTTTTCCCATCGTTTTGA 1584 0.4381 MAGGGGKVDDFQPHPVKEQLPGVDYCVTSSPSWPEGIILGFQHYLVVLGTIVIVSTLLVPLIGGGNVEKAEMIQTLLFVAAINTLLQTWFGTRLPVVVGASYAFLIPAVSIAFSSRMSLFADPHQRFKQSMRAIQGALIVASLFQIIIGFFGFWRIFARFLCPLSVVPLVTLTGLGLFILGFPRLADCVEIGLPALIILVILSQYIPQMMKSRAPDRFAIIVSIGIAWVFAEILTAAGAYNKRSPKTQLSCRTDRSGLISAAPWIRVPYPFQWGRPSFNAGDTFAMVAACLVAIVESTGTFIAASRFGSATPVPPSVLSRGVGWLGIGTLLDGFFGTATGSTASVENAGLLGLTRVGSRRVIQISAVFMLFFSILGKFGAVLASIPLPIIAAIYCVLFAFVVSAGLGFLQFCNLNSFRSMFILGFSLFMGLSVPQYFNEYLLLSGHGPVHTRTTAFNNIVQVIFSSPATVAIIVAYLLDLTVSRGDSSTRRDSGRHWWEKFRTFNQDTRSEEFYSLPLNLNRFFPSF 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02484 527 Pfam Permease family 37 437 IPR006043 GO:0016020|GO:0022857|GO:0055085
Cca02g02484 527 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 5 526 - -
Cca02g02484 527 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED 5 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02484 Cca-Chr2 45981879 45986416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g02484 7 527 Organic Solute Cotransporters AT1G49960 71.319 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02484 - K23717 gmx:100820533 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02484 02 45981879 45986416 Cca02g02484 02 45981879 45986416 ECH