Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02479 ATGAGTTCAATAGGGCAAAGCATATTGATGGCACTCACTGTTACAGTAAACAAGTATGCTTCATCTAATTTGCAAGCAGTTCAAGGAAAAGCACCAAACAAAACCACACCAACAACCTTAACCACAAGAAGAGGACTTCTCTTATCCGCTGCAATCGCCACCACCCAAGTACCTGACTCTAGGACTCAACTTCTTAAAAAATATCAGAAGAAATCAGAGGAAAACAAGGAGAAAAACGACAAAGAGAGGCTGGAGAGTTACTACAAGCGAAACTACAAGGATTACTTTGAATTGATGGAAGGAACGTTGAAGAGAAAGGAGGATGGGCAACTTTCAGATACAGAAAAGGGTATCCTTGATTGGCTTCAAAAAAACAAGTGA 381 0.4016 MSSIGQSILMALTVTVNKYASSNLQAVQGKAPNKTTPTTLTTRRGLLLSAAIATTQVPDSRTQLLKKYQKKSEENKEKNDKERLESYYKRNYKDYFELMEGTLKRKEDGQLSDTEKGILDWLQKNK 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02479 126 Coils Coil 61 85 - -
Cca02g02479 126 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 88 IPR008796 GO:0009522|GO:0015979
Cca02g02479 126 PANTHER UNNAMED PRODUCT 12 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02479 Cca-Chr2 45923010 45923694 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02479 - - gmx:100800755 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02479 02 45923010 45923694 Cca02g02479 02 45923010 45923694 ECH