Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02468 ATGGTTTTGAAGTCAATGGTTGCTTCAGCGAGCGATCTAAGTGTGGTGAGTGTTGCAGGGAACCCTCCCCTCCATTTCAACAATCGGGTTTTCGGCGGTGGCCAAGTCACTAGCCTCGGTTTTCGTTTCAACAGAGAGAAATGGAAAGGAAACGAAAGGTTCAACTTGAAGGTTCGTGCAGCGGTGGAAGTGGGTGTGGAGGGGTCAAATAAGGGAGAGGCTTTGGAGGGTGCTTTTGGGTTGGACGTGGTTTCCGAGGGAGATTTAACGGTGAAGGGGTTTGCAGGGTTGAGGAAGACCAAGCTCGTTTGCACTATTGGCCCTGCTTGCAGCTCATTGGAGGATCTCGAGCACTTGGCCTTGGGAGGCATGAGCGTTGCCAGGCTCAACATGTGCCATGGCACTAGGGAGTGGCACCGTGACGTCATTAGGAAGATCAAGAAGCTGAATGAGGAGAAAGGGTTCTCTGTTTCTCTGATGATTGACACTGAGGGTAGTCAGGTTCATGTTGTTGATCATGGAGCTCCTTCCTCGGTTAAAGTAGAGGAAGGTTCGATTTGGCAATTTACTGCTGAGCATTTTGAGGGTTCTCGCCCATTCACTGTTCAAACAAACAACAGAGGTTTTTCTGAAGGTATTGAAGTGGGTGATGAACTTGTTATTGATGGTGGAATGGCATGCTTTGAAGTCACTGAAAAGACTGGTAATGATTTGCATTGTAAGTGCATAGATGCTGGTCTTTTCCTGCCTGGAGCGAAATTTAGTTTCTGGAGAGAGGGAAAGCTTGTAAGGGGGAAAAACAAGCTTCCTACTCTATCAACTAAGGATTGGGCTGACATTGATTTTGGTATAGCTGAGGGAGTCGATTTTTTTGCCTTATCCTTTGTCAATCACGCTGATTCTGTAAAGGATCTAAAGAAGTACCTCTCTACGAAGTCAACCAAATCCATTAAAGTTTTGGCAAAGATAGAAAGTTTAGAATCCCTTCATAAACTAGAGGAAATAGTGCGAGCTTCTGATGGAATCATGGTGGCTCGAGGTGACCTAGGGGTCGAAATACCACTTGAACAGATTCCTACAGTCCAAGAGGATATAATTTACGTATGCAGACAACTAAACAAGCCAGTAATTGTTGCTTCTCAGCTCCTTGAGTCAATGGTTGAGTATCCAACACCAACACGCGCTGAGGTAAAATCAACTCATACATCCAGGATGATTATTATCAACTTGATTGAGAAGAAATGTTACTAG 1251 0.4516 MVLKSMVASASDLSVVSVAGNPPLHFNNRVFGGGQVTSLGFRFNREKWKGNERFNLKVRAAVEVGVEGSNKGEALEGAFGLDVVSEGDLTVKGFAGLRKTKLVCTIGPACSSLEDLEHLALGGMSVARLNMCHGTREWHRDVIRKIKKLNEEKGFSVSLMIDTEGSQVHVVDHGAPSSVKVEEGSIWQFTAEHFEGSRPFTVQTNNRGFSEGIEVGDELVIDGGMACFEVTEKTGNDLHCKCIDAGLFLPGAKFSFWREGKLVRGKNKLPTLSTKDWADIDFGIAEGVDFFALSFVNHADSVKDLKKYLSTKSTKSIKVLAKIESLESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVKSTHTSRMIIINLIEKKCY 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02468 416 ProSitePatterns Pyruvate kinase active site signature. 317 329 IPR018209 GO:0004743|GO:0006096
Cca02g02468 416 PRINTS Pyruvate kinase family signature 319 345 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cca02g02468 416 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cca02g02468 416 PRINTS Pyruvate kinase family signature 346 370 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cca02g02468 416 PRINTS Pyruvate kinase family signature 155 171 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cca02g02468 416 PRINTS Pyruvate kinase family signature 371 395 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cca02g02468 416 Gene3D - 167 269 IPR015806 GO:0004743|GO:0006096
Cca02g02468 416 PANTHER PYRUVATE KINASE 44 398 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cca02g02468 416 Pfam Pyruvate kinase, barrel domain 98 398 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Cca02g02468 416 Gene3D - 100 398 IPR040442 -
Cca02g02468 416 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 92 400 IPR015813 GO:0003824
Cca02g02468 416 PANTHER PYRUVATE KINASE 44 398 - -
Cca02g02468 416 SUPERFAMILY PK beta-barrel domain-like 173 251 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02468 Cca-Chr2 45833510 45838268 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02468 K00873 - gmx:100780644 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02468 02 45833510 45838268 Cca02g02468 02 45833510 45838268 ECH