Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02331 ATGAATGAAACAGAAAAGAAGAAGAAACATGTTATTAGGGAACCACCTTCAGTTCCTTTTATATGGGAAGTAAAGCCAGGCACTCCTAAGAAAGATTGGAAGCCTGAGGTCCCTTCACTTGGCCACTTCCCTAAAACTCCACTTAAACTTATTGCCTCAATTCCCTTTGTTTGGGAGGAAAAGCCTGGAATACCCCTTCCAAATGTCTCACATGTTTCAGTGCCTCCAAAGCCAGAGAAAATGCTTATTCATGTAGCATCATCTTCGGGCTTTTCTTTTCCATGCAACTTTGGCCATGACGATGCAAAAGACAAAGGAAGCAAAACCAGCTTAGACCTTGAAGCATTTAGCTTTGATGCAGATGAAACATCAGAGGCAGAGAGTAGCACAAGCAGCTATGCAACTGGCAGGTCAAGTCCTGTTGGTGCTACTTTCCTTGAGTGCCTATTTCCTTTGTATCCACCTAAGTCTGGCTTCCTTCAAAGGGATGATGAGCACATGGAAAAGTTTACTTCAAGTTCGCAAGAACTAAGAGCCGAAGACTTTGAACACGATGGAGATTGTGGCAGTGACCTGGTGACGAGGCCACCAACACTTGGAGAACTGATTATGATGAGCAGAAGAAGAAGCTGCAGAAGGAAAGCAGTTCTAATGAAAAAATGGGATCCACCCCAGAAAATCACAAGAAAGCAAGCTTTTGGATGCTTTTCCAGTGTAACCAACTCCAATATGATTGATGGACTGCTGAAGAGAAAGTACTTCCCCAGATTGAAACTGGTATAG 783 0.433 MNETEKKKKHVIREPPSVPFIWEVKPGTPKKDWKPEVPSLGHFPKTPLKLIASIPFVWEEKPGIPLPNVSHVSVPPKPEKMLIHVASSSGFSFPCNFGHDDAKDKGSKTSLDLEAFSFDADETSEAESSTSSYATGRSSPVGATFLECLFPLYPPKSGFLQRDDEHMEKFTSSSQELRAEDFEHDGDCGSDLVTRPPTLGELIMMSRRRSCRRKAVLMKKWDPPQKITRKQAFGCFSSVTNSNMIDGLLKRKYFPRLKLV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02331 260 Pfam Protein of unknown function (DUF688) 9 40 IPR007789 -
Cca02g02331 260 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 4 122 - -
Cca02g02331 260 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 123 260 - -
Cca02g02331 260 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 123 260 - -
Cca02g02331 260 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 4 122 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02331 - - gmx:100806447 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02331 02 44088249 44089865 Cca02g02331 02 44088249 44089865 ECH