Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02328 ATGCTTCCCAAATCCCCCGAACAACTAAACACCAAAACCTCCTTCACTACCCTCACCACGCTCCTCCAAACCCCTCTCTCCCCCCAAAACCCTCGCACATGGATCATCCTCACCGTCCTCTTCATCCAGATCCTCCTCCTCTGCAGCCTCCGTAGCTTCCCCTCCTCCATTCCCTCTCCTCTCCCCGCCGTCCACTACTCCGCCCGCGCCCTCCAACAATGCGCCTCCGGCAACCTTTTCGTCTACCACCTCCCCGAAACCTTCAACCACCAAATCCTCCAAAATTGCGACAATCTCAACCCCTGGAGCTCCCGCTGCGACGCGCTCTCCAACCACGGCTTCGGCCAACCCGCCGCCGCCGCCCTCGCCGGAATCGTCCCGGAGGATCTCCTCCCGGCGTGGCACTGGACGGACCAATTCGTCACCGAAATCCTCTTCCACGATCGCATAATCAACCACAAGTGCAGGGTCATGGATCCCGAATCCGCTACGGCCTTCTACATCCCGTTCTACGCTGGACTCGCAGTGGGGAAGTACCTGTGGCTAAATTCAACCGCAGAGGAACGCGATCGCCACTGCGATATGATGTTAAGCTGGATTAAGGACCAACCCTATTTTAAAAGATCCAACGGCTGGGATCACTTCATTACCATGGGGCGCATCACGTGGGATTTTCGTCGCTCTAAAGACGAGGATTGGGGTTCTAGCTGCATCTACAAGGCGGGCATAAGAAACGTGACGCGCCTTCTCATCGAGCGTAATCCTTGGGACTATTTCGACATCGGTGTTCCCTACCCCACCGGATTCCACCCGCGCTCCAAATCCGACCTCACGCGCTGGCAGCAATTCGTCCGCGCGCGCCCACGCCACGCGCTCTTCTGCTTCGCCGGCGCGCCTCGCCGCGCCTTCCGCAACGACTTCCGCGGGGTTCTGCTGAGTCAGTGCCGCGACGCGGGCGAGTCGTGCCGCGAGGTGAACTGCGCCGGGACCCGGTGCTCGAACGGCACGTCGGCGATCCTCGAGACTTTTCTGGACTCCGATTTCTGCTTGCAGCCGAGGGGGGACAGCTTCACGCGCCGCTCCATTTTCGATTGCATGGTGGCCGGTTCGATTCCGGTTTTCTTCTGGCGGCGAACCGCGTATCTGCAGTACCAGTGGTTCTTGCCGGGTGAACCGGAGAGTTACTCGGTTTTCATAGACCGGAACGCGGTGAAGAATGGGAGTTTGACCGTGAAAGGCGTGCTTGAGAGGTTCAGCAAGGAGGAGGTGAGGAAAATGAGGGAGAAAGTGATCGAGTACATTCCGAGGTTGGTGTACGCGAAAACGAAAGACGGGTTAGAGGGTGTGAAGGACGCATTCGATGTTGCCATCGAAGGTTTGTTCGCAAGGTTTAAGGAACAAGAACAACCTGAATTTCATAAGTGGAAATAA 1431 0.5758 MLPKSPEQLNTKTSFTTLTTLLQTPLSPQNPRTWIILTVLFIQILLLCSLRSFPSSIPSPLPAVHYSARALQQCASGNLFVYHLPETFNHQILQNCDNLNPWSSRCDALSNHGFGQPAAAALAGIVPEDLLPAWHWTDQFVTEILFHDRIINHKCRVMDPESATAFYIPFYAGLAVGKYLWLNSTAEERDRHCDMMLSWIKDQPYFKRSNGWDHFITMGRITWDFRRSKDEDWGSSCIYKAGIRNVTRLLIERNPWDYFDIGVPYPTGFHPRSKSDLTRWQQFVRARPRHALFCFAGAPRRAFRNDFRGVLLSQCRDAGESCREVNCAGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRTAYLQYQWFLPGEPESYSVFIDRNAVKNGSLTVKGVLERFSKEEVRKMREKVIEYIPRLVYAKTKDGLEGVKDAFDVAIEGLFARFKEQEQPEFHKWK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02328 476 Pfam Exostosin family 74 406 IPR040911 -
Cca02g02328 476 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 9 469 - -
Cca02g02328 476 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 9 469 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02328 Cca-Chr2 44020651 44022859 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02328 - - gsj:114403132 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02328 02 44020651 44022859 Cca02g02328 02 44020651 44022859 ECH