Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02326 ATGATCAAACAGGTTATTCTTTGGATGCTCTTCTTGGTCTCTGGATCGACCCTCTCAGTTTCAGAGTCTCAATCTGCTTCTCTTCTGCCTCATGCTGCTGAGTCCTTCAATGTCAGCTATATCCAGATGAAGAACGCGGGGAGTTGTTCTTACTCGGTGGCTATATCTACTAGTTGTTCGTCCCCTAGGTATACAAGGGATCACGTCAGTATTGCTTTTGGGGATGCTTATGGCAACCAGATATATGCACCAAGACTGGATGATCCAGCTTCAGGTACATTTGAGAGCTGTTCTTCAGATACATTTCAGATAAGTGGTCCATGTGCATATCAGATATGCTATGTGTACCTATATAGATCTGGATCAGATGGTTGGAAGCCTGAAAGTGTGAAAATCAATAGTTATAATGGCAGGCCTGTTACTTTCTATTACAATACATATGTCCCCAGAGATACGTGGTATGGGTTTGATTTGTGCAACAGTGCTTCTTCAACTTCGTCCCAGGTATCTATGCAGAAATGGCTTATAtttatggttttaggatttgttcttagtttttggttataa 567 0.3968 MIKQVILWMLFLVSGSTLSVSESQSASLLPHAAESFNVSYIQMKNAGSCSYSVAISTSCSSPRYTRDHVSIAFGDAYGNQIYAPRLDDPASGTFESCSSDTFQISGPCAYQICYVYLYRSGSDGWKPESVKINSYNGRPVTFYYNTYVPRDTWYGFDLCNSASSTSSQVSMQKWLIFMVLGFVLSFWL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02326 188 CDD PLAT 49 160 - -
Cca02g02326 188 Gene3D PLAT/LH2 domain 46 155 - -
Cca02g02326 188 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 47 156 IPR036392 GO:0005515
Cca02g02326 188 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
Cca02g02326 188 PANTHER - 4 188 - -
Cca02g02326 188 PANTHER EMBRYO-SPECIFIC PROTEIN 4 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02326 Cca-Chr2 44003420 44006515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02326 - - gmx:100499692 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02326 02 44003420 44006515 Cca02g02326 02 44003420 44006515 ECH