Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02293 ATGGAGTCGGCGAGTGTGATTAAAGCATCCTTCCCAATTTTCAGGAGCAACCCATTTTCCCTCTCAACAAGACTTCTTAGTCTTAGACCCTTCAATGTTTCCGTCAAACCCCCACCCCCTGATTTCGATTACAGGAGAGAGATGTCCGAGGAATCCAGAGCCGCCATAGCTGAATCTCACCCTCAGTTGCTCGACTTGGCTGACAACGGAACCTTGGTTTTGGTCCAAAAGAAAAGCTTTGGTCCTGTCCCTCCTTGGAGAACCCAATTCGTCGAACCTGAATCCATTTGGTTGCTAGGAACTACTCATGTTTCTGAGGATTCGGCTTTGCAAGTAGAACGTGTGGTGCGGGCTCTCAAGCCAGATAATGTTGTTGTTGAACTCTGCAGAAGCAGAGCTGGGATCATGTATGCTGCTGCGAATGATGAGCTTGGCAAACAGATGCGTTCTAATATGTTCTCCTTAAGCGGCACTGGTTTCTTTGGAGCTGTTGGTCGTAGCATAAACCTAGGTGGTCAAACTGCTTTGGCATTACGGTTACTTTTGGCTGCTTTTTCATCGAAGATCTCTTCAGATATTAACCGTCCTTTTGGTGATGAGTTCCGTGCAGCTCGAAAAGCTTCCGAGGAAGTTGGTGCACAAATAGTTTTAGGAGATCGGCCAATTGAAATAACGCTTCAAAGAGCATGGAAGGCTATGAAATGGACTGAGAAACTAAATTTAGTATTATCAATTATTCGTGGGATATCATCTTCGTCTAACATTTCTGTAAATAAGCTCAAGTTGCAGGAAGCAAGTCAGAATGATGGTCCATTTCAGCTTTATGAGCAACTCAGTTTTTCATATCCTTCCTTACTGTCACCTCTCATACATGAACGAGATACTTATCTTGCATGGTCATTGAAGCGGAGCAAAGCTGTGAATAACAGTAAAAGTGTGGTGGGTGTGATTGGGAAAGGGCATATGAACGGTGTAATATATGCATTGTTATCTGACACGGGGAATTTGAGGTTTCGAGATCTAGTAGGGAAAAAATCATATGATGGAGGTTCTAGCGGTTGGATAGATGGCTTAATCAAGAGTTTAGTGAGAGACACTGTCATTGGCATCTTCTTATGGGCCTTATATGAATTAATAAATGGAGGAACGTAA 1152 0.434 MESASVIKASFPIFRSNPFSLSTRLLSLRPFNVSVKPPPPDFDYRREMSEESRAAIAESHPQLLDLADNGTLVLVQKKSFGPVPPWRTQFVEPESIWLLGTTHVSEDSALQVERVVRALKPDNVVVELCRSRAGIMYAAANDELGKQMRSNMFSLSGTGFFGAVGRSINLGGQTALALRLLLAAFSSKISSDINRPFGDEFRAARKASEEVGAQIVLGDRPIEITLQRAWKAMKWTEKLNLVLSIIRGISSSSNISVNKLKLQEASQNDGPFQLYEQLSFSYPSLLSPLIHERDTYLAWSLKRSKAVNNSKSVVGVIGKGHMNGVIYALLSDTGNLRFRDLVGKKSYDGGSSGWIDGLIKSLVRDTVIGIFLWALYELINGGT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02293 383 CDD TraB_PrgY-like 96 329 IPR046345 -
Cca02g02293 383 PANTHER TRAB DOMAIN-CONTAINING PROTEIN 33 380 - -
Cca02g02293 383 PANTHER PHEROMONE SHUTDOWN PROTEIN 33 380 IPR046345 -
Cca02g02293 383 Pfam TraB/PrgY/gumN family 86 325 IPR002816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02293 Cca-Chr2 43548132 43556519 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02293 - - aprc:113873197 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02293 02 43548132 43556519 Cca02g02293 02 43548132 43556519 ECH