Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g02264 ATGGATTCAAGAGTAGTTCAAAATCAAGAGCATGAGAACGATGAACAAAGCCCCCACATTGTTGCCTCGGAGCAtgaacaatattctgaccatgataagaagtctgttctgaacaaggtcaaagcaaaggctaagaaaattaaggacacaattaaaaagcatggccatcaagttcttgatcgtggtcatgacgatcaacacaccattaatgatcatgaggatgaagaaatgactgaagatccagaggttcatgaaacattaaTTCATGAAAGTGAAGATGTTAAAACTATTACACCTACATCTGGGAAAGTCGAAAATTTAGGAAAGTCAGGAAATGATTTTGGAGGCACAACAGTTAAGGGAGAAGAACCTGGTCACGATGCACTGCTTGGAGGCGTTTCTTCAACTACTGAAATTGATCAAAACACAGACAGTGAGTCAGCCGAAATATTTTCTGTGGAAGAGAAAGCAGTACCAAATGACAATTTGGAGAGATCAATAGGCTTGGAGGAAGAGCATCGTGCTCCAGAAAGTACACCTGAGACGTATAAGCCTCCCAGTTATCACACCAAAGTCCCTGATCCAAGTGGTGTAGAAAAGGATGAAATAGAAATCACACCAGTTGAGGAATCTTTTGGGAGAATGAATGTGAAGGATGAGCCAGAGCCTACTCCAGAACCAAATGTCCAGCCATCTGTAGTTGTTGATCCTGAATTCCCTCCTGCTGGAAGCCATGATCAGTTTGTGCCACACCTCTCTGCTGCAACACAAACTCATGATCACTTCACTAAGGATAACATATCATCCACAAACATCAATACAAACCCTGCAGAAACTGGACAAACTTTTAACACCATCACGACCCCGGTTGAAGAACAACCACTGAATGAAGCAAGCACCGATGAAGTTGTCTTTCCTAAAGAAGTCATAGCTTCTGAGGTGGGGTCAGGAGAGAATGACAACATAAAGGAGAAGGTGATAACAAATGAAGAGCACCAAAAAAGTGGGGATGCTTCTCCTAACATGTCTGACTCAACTGCACAAAATGGAAAGAACATTGCTCACTCTCTGACAGAGAAATTAGCTCCAGTTTATGAGAAGGTTGCAGGGGTAGGAAGTGCAGTGAAGTCCAAGGTGACTGGTGGTGTTGGAAGTGAAACAAAAGATGGGGTTTCTGTGAAGGACTATTTGGCTGAGAAGCTAAGGCCTGGTGAAGAAGACAAGGCACTTTCTGAGGTAATCTCAGAAGCTTTGCATAAGCGGAAGGAAGAGGCAGTGGCAAATGAGGATGAGAAAATGTGTGAAGAGAAAGATTGCTGTGTGAACACAAACAGTCAAGGAAAAGGTGTGGTTGACAAGCTTAAGGGTGTTGTTGGCTCTTGGTTTGGCAAATCTGAGGAAAAAGGAGGTGGAGATTTATCCAAGAATACAAATTCTGGTGCAGAAGTGGAACAGGTTAACCAAGTTGTGGGTGAAATCAAGAGTAGTCAAATTGAAGATCGCTGA 1506 0.3792 MDSRVVQNQEHENDEQSPHIVASEHEQYSDHDKKSVLNKVKAKAKKIKDTIKKHGHQVLDRGHDDQHTINDHEDEEMTEDPEVHETLIHESEDVKTITPTSGKVENLGKSGNDFGGTTVKGEEPGHDALLGGVSSTTEIDQNTDSESAEIFSVEEKAVPNDNLERSIGLEEEHRAPESTPETYKPPSYHTKVPDPSGVEKDEIEITPVEESFGRMNVKDEPEPTPEPNVQPSVVVDPEFPPAGSHDQFVPHLSAATQTHDHFTKDNISSTNINTNPAETGQTFNTITTPVEEQPLNEASTDEVVFPKEVIASEVGSGENDNIKEKVITNEEHQKSGDASPNMSDSTAQNGKNIAHSLTEKLAPVYEKVAGVGSAVKSKVTGGVGSETKDGVSVKDYLAEKLRPGEEDKALSEVISEALHKRKEEAVANEDEKMCEEKDCCVNTNSQGKGVVDKLKGVVGSWFGKSEEKGGGDLSKNTNSGAEVEQVNQVVGEIKSSQIEDR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g02264 501 MobiDBLite consensus disorder prediction 318 332 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 472 494 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 311 355 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 464 501 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 1 37 - -
Cca02g02264 501 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 497 IPR037491 GO:0009737
Cca02g02264 501 PANTHER - 1 497 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 93 113 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 333 355 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 158 179 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 134 148 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 53 74 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 1 246 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 38 52 - -
Cca02g02264 501 MobiDBLite consensus disorder prediction 194 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g02264 Cca-Chr2 43181099 43183954 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g02264 - - gmx:100791989 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g02264 02 43181099 43183954 Cca02g02264 02 43181099 43183954 ECH